Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P03180_001 | Banana | nucleus | 53.9 | 52.73 |
| Os01t0169900-01 | Rice | plasma membrane | 44.42 | 41.21 |
| Zm00001d039686_P001 | Maize | nucleus | 43.12 | 40.85 |
| Os05t0169400-01 | Rice | plastid | 39.78 | 39.93 |
| Zm00001d008708_P001 | Maize | extracellular | 41.64 | 39.79 |
| TraesCS1A01G113700.1 | Wheat | nucleus | 42.38 | 39.72 |
| KXG31759 | Sorghum | nucleus | 43.31 | 39.63 |
| HORVU1Hr1G025020.4 | Barley | nucleus | 42.01 | 39.58 |
| TraesCS1D01G115300.1 | Wheat | nucleus | 42.19 | 39.55 |
| VIT_14s0066g00800.t01 | Wine grape | nucleus | 41.08 | 39.25 |
| TraesCS1B01G134000.1 | Wheat | nucleus | 41.64 | 38.75 |
| EES19114 | Sorghum | nucleus | 40.89 | 37.8 |
| Solyc02g086520.2.1 | Tomato | nucleus | 37.55 | 37.06 |
| VIT_17s0000g08970.t01 | Wine grape | nucleus | 31.97 | 36.67 |
| KRH56551 | Soybean | nucleus | 38.66 | 36.3 |
| KRG93222 | Soybean | nucleus | 38.66 | 35.99 |
| TraesCS3D01G093200.1 | Wheat | nucleus | 39.22 | 35.82 |
| TraesCS3A01G092900.1 | Wheat | nucleus | 40.15 | 35.82 |
| TraesCS3B01G108100.1 | Wheat | nucleus | 39.78 | 35.49 |
| HORVU3Hr1G016420.3 | Barley | cytosol, nucleus | 39.22 | 35.46 |
| CDX91045 | Canola | nucleus | 31.6 | 34.98 |
| CDX85594 | Canola | nucleus | 31.04 | 34.29 |
| PGSC0003DMT400032802 | Potato | nucleus | 34.39 | 34.07 |
| PGSC0003DMT400072130 | Potato | nucleus | 31.97 | 33.08 |
| AT3G01560.1 | Thale cress | nucleus | 31.41 | 33.07 |
| Bra023474.1-P | Field mustard | nucleus | 32.53 | 32.65 |
| Solyc12g035240.1.1 | Tomato | nucleus | 29.55 | 32.25 |
| AT5G14540.1 | Thale cress | nucleus | 31.97 | 31.44 |
| GSMUA_Achr4P07980_001 | Banana | nucleus | 18.22 | 20.55 |
| GSMUA_Achr4P15050_001 | Banana | nucleus | 16.36 | 17.78 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P14190_001 | EnsemblPlants:GSMUA_Achr2T14190_001 | EnsemblPlantsGene:GSMUA_Achr2G14190_001 | InterPro:DUF1421 | ncoils:Coil | PANTHER:PTHR31805 |
| PANTHER:PTHR31805:SF12 | PFAM:PF07223 | SEG:seg | UniParc:UPI0002950890 | UniProt:M0S7W0 | MapMan:35.2 |
Description
proline-rich family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G14190_001]
Coordinates
chr2:+:16039726..16045553
Molecular Weight (calculated)
57951.6 Da
IEP (calculated)
6.156
GRAVY (calculated)
-0.699
Length
538 amino acids
Sequence
(BLAST)
(BLAST)
001: MNATKFMDKQ ITELSGTSQA PGEFFDFVNS QEDRRVNGVA GGRSVKQEQQ QESEILPSYD FHPIRAVGSA SLSIAGGGGG GGGPSDSWPS WGSIDSKLAS
101: SNLKNAGVLE SHELTKTSHE KEKSAHDIAF VAEIDHTVKR YADNLMNALE GLSSRLSKIE SRTHHMENSV DELKVAIENN NGSTNGKLKQ IENVLKEVHS
201: SVQILQDKQQ VTEAQLHLAQ LITSEGDQQL PENSKTGDSD SQQHELPPPQ QPVQQPYQRP VPQAQPTVLP APPPLPQQIP PPQIPQLPQS QILSLPSVPQ
301: EFRIQAAPPP LPPQPQHYQP SLQHPQYSQS PQSQQPVSPS PQLPPAMSRH PEESVPYMSP PSSYAPSIRQ PAPFPQPLTA PPQQFYGPMP NMYEPPASKP
401: SSGLPPFSSG YRPPVGPGYH DSYGYSGLPS GQSSSASKPL PIASSVSSGG TSNYPRLPTA QILPQAAPTS SASGGSSGTR VAIDDVVEKV ATMGFSRDQV
501: RATVRKLTEN GQSVDLNVVL DKLMNDGEIQ PQKGWFGR
101: SNLKNAGVLE SHELTKTSHE KEKSAHDIAF VAEIDHTVKR YADNLMNALE GLSSRLSKIE SRTHHMENSV DELKVAIENN NGSTNGKLKQ IENVLKEVHS
201: SVQILQDKQQ VTEAQLHLAQ LITSEGDQQL PENSKTGDSD SQQHELPPPQ QPVQQPYQRP VPQAQPTVLP APPPLPQQIP PPQIPQLPQS QILSLPSVPQ
301: EFRIQAAPPP LPPQPQHYQP SLQHPQYSQS PQSQQPVSPS PQLPPAMSRH PEESVPYMSP PSSYAPSIRQ PAPFPQPLTA PPQQFYGPMP NMYEPPASKP
401: SSGLPPFSSG YRPPVGPGYH DSYGYSGLPS GQSSSASKPL PIASSVSSGG TSNYPRLPTA QILPQAAPTS SASGGSSGTR VAIDDVVEKV ATMGFSRDQV
501: RATVRKLTEN GQSVDLNVVL DKLMNDGEIQ PQKGWFGR
001: MNTCQFMDKQ IMDLSSSSSL PSTDFIDLMN NHDGDDHQKK QVIGDNGLDS KKEVIVPSYD FHPIRPTTAA RLSHSALDLA GSTTRVNWSA SDYKPVSTTS
101: PNTNFGSLDS IEPSKLVPDK GQNVFNTTIM SEIIDRTMKK HTDTLLHVME GVSARLSQLE TRTHNLENLV DDLKVSVDNS HGSTDGKMRQ LKNILVEVQS
201: GVQLLKDKQE ILEAQLSKHQ VSNQHAKTHS LHVDPTAQSP APVPMQQFPL TSFPQPPSST AAPSQPPSSQ LPPQLPTQFS SQQEPYCPPP SHPQPPPSNP
301: PPYQAPQTQT PHQPSYQSPP QQPQYPQQPP PSSGYNPEEQ PPYQMQSYPP NPPRQQPPAG STPSQQFYNP PQPQPSMYDG AGGRSNSGFP SGYLSEPYTY
401: SGSPMSSAKP PHISSNGTGY PQLSNSRPLP HALPMVSAVS SGGGSSSPRS ESRAPIDDVI DRVTTMGFPR DQVRATVRKL TENGQAVDLN VVLDKLMNEG
501: GAPPGGFFGG R
101: PNTNFGSLDS IEPSKLVPDK GQNVFNTTIM SEIIDRTMKK HTDTLLHVME GVSARLSQLE TRTHNLENLV DDLKVSVDNS HGSTDGKMRQ LKNILVEVQS
201: GVQLLKDKQE ILEAQLSKHQ VSNQHAKTHS LHVDPTAQSP APVPMQQFPL TSFPQPPSST AAPSQPPSSQ LPPQLPTQFS SQQEPYCPPP SHPQPPPSNP
301: PPYQAPQTQT PHQPSYQSPP QQPQYPQQPP PSSGYNPEEQ PPYQMQSYPP NPPRQQPPAG STPSQQFYNP PQPQPSMYDG AGGRSNSGFP SGYLSEPYTY
401: SGSPMSSAKP PHISSNGTGY PQLSNSRPLP HALPMVSAVS SGGGSSSPRS ESRAPIDDVI DRVTTMGFPR DQVRATVRKL TENGQAVDLN VVLDKLMNEG
501: GAPPGGFFGG R
Arabidopsis Description
Proline-rich receptor-like kinase, putative (DUF1421) [Source:UniProtKB/TrEMBL;Acc:F4J3J5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.