Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G108100.1 | Wheat | nucleus | 95.76 | 93.53 |
| TraesCS3A01G092900.1 | Wheat | nucleus | 91.34 | 89.22 |
| HORVU3Hr1G016420.3 | Barley | cytosol, nucleus | 88.12 | 87.23 |
| Os01t0169900-01 | Rice | plasma membrane | 60.78 | 61.72 |
| Zm00001d008708_P001 | Maize | extracellular | 57.22 | 59.86 |
| Zm00001d039686_P001 | Maize | nucleus | 57.56 | 59.68 |
| KXG31759 | Sorghum | nucleus | 57.89 | 57.99 |
| TraesCS1D01G115300.1 | Wheat | nucleus | 50.76 | 52.09 |
| GSMUA_Achr6P03180_001 | Banana | nucleus | 38.54 | 41.27 |
| GSMUA_Achr2P14190_001 | Banana | nucleus | 35.82 | 39.22 |
| VIT_14s0066g00800.t01 | Wine grape | nucleus | 37.35 | 39.08 |
| KRH56551 | Soybean | nucleus | 37.69 | 38.74 |
| PGSC0003DMT400032802 | Potato | nucleus | 34.63 | 37.57 |
| Solyc02g086520.2.1 | Tomato | nucleus | 34.63 | 37.43 |
| KRG93222 | Soybean | nucleus | 36.5 | 37.2 |
| PGSC0003DMT400072130 | Potato | nucleus | 32.26 | 36.54 |
| CDX91045 | Canola | nucleus | 30.05 | 36.42 |
| VIT_17s0000g08970.t01 | Wine grape | nucleus | 28.86 | 36.25 |
| CDX85594 | Canola | nucleus | 29.71 | 35.93 |
| Solyc12g035240.1.1 | Tomato | nucleus | 29.71 | 35.5 |
| AT5G14540.1 | Thale cress | nucleus | 32.43 | 34.92 |
| AT3G01560.1 | Thale cress | nucleus | 30.05 | 34.64 |
| Bra023474.1-P | Field mustard | nucleus | 31.07 | 34.14 |
| TraesCS3D01G292600.1 | Wheat | nucleus | 21.39 | 20.79 |
| TraesCS1D01G402000.1 | Wheat | nucleus | 15.45 | 17.14 |
| TraesCS3D01G271600.1 | Wheat | plastid | 15.11 | 16.6 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G093200.1 | EnsemblPlantsGene:TraesCS3D01G093200 | InterPro:DUF1421 | ncoils:Coil | PANTHER:PTHR31805 | PANTHER:PTHR31805:SF12 |
| PFAM:PF07223 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr3D:+:47188821..47192332
Molecular Weight (calculated)
62501.3 Da
IEP (calculated)
6.195
GRAVY (calculated)
-0.738
Length
589 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKQILGLAA SAAPSPSLAG GGSGGSELLD LMGPDPQEES EDGLRRRHHH SANGTATDVL PSYDFQPMRT ATAAPAAAPP SWGSLDSNSK AASVSASASS
101: PYNLKSAGIL ENRVPKNVNH EEDRSNFGLV TIADIDRTMK KYSDNLLYAL EGVSSRLSQL ESRTHHLESS VDEFKLTIGN YNGSTDGKLR QLENMLREVQ
201: AGVQIMRDKQ EIVETQLHLA KLQIPKTETQ SSENSGVGQA DSRHQSVAPQ QAGVPPQHQP QTFPALPAPN APPPPPTLQS QPPAQFLGHS SAPSVPALPQ
301: EPYYTPSAQT TEAIHQQYQA PPVPQPQAPP APQQQYQAPP APPQQYQAPP VPQAHAPPAP PQQYQAPPVP QAQAPPAPPQ QYQTPSQFSQ YSQQPQPTNV
401: NPSSPLAPPA PQQTEYAPSH SYTPNVRTPS AYMPPPNESA LPFYGQNPSM YEPPAVRPNS GPPPSYGAPG YGPQGGSSFS ESYGYTGSPS YRGNAGMKST
501: PFAPSGPSSG GSGNSYGTRL PTARILPQAE PVSSSPTAAS GNRVALDDVV EKVATMGFSR EQVRATVRRL TENGQNVDLN VVLDKLMNG
101: PYNLKSAGIL ENRVPKNVNH EEDRSNFGLV TIADIDRTMK KYSDNLLYAL EGVSSRLSQL ESRTHHLESS VDEFKLTIGN YNGSTDGKLR QLENMLREVQ
201: AGVQIMRDKQ EIVETQLHLA KLQIPKTETQ SSENSGVGQA DSRHQSVAPQ QAGVPPQHQP QTFPALPAPN APPPPPTLQS QPPAQFLGHS SAPSVPALPQ
301: EPYYTPSAQT TEAIHQQYQA PPVPQPQAPP APQQQYQAPP APPQQYQAPP VPQAHAPPAP PQQYQAPPVP QAQAPPAPPQ QYQTPSQFSQ YSQQPQPTNV
401: NPSSPLAPPA PQQTEYAPSH SYTPNVRTPS AYMPPPNESA LPFYGQNPSM YEPPAVRPNS GPPPSYGAPG YGPQGGSSFS ESYGYTGSPS YRGNAGMKST
501: PFAPSGPSSG GSGNSYGTRL PTARILPQAE PVSSSPTAAS GNRVALDDVV EKVATMGFSR EQVRATVRRL TENGQNVDLN VVLDKLMNG
001: MNTCQFMDKQ IMDLSSSSSL PSTDFIDLMN NHDGDDHQKK QVIGDNGLDS KKEVIVPSYD FHPIRPTTAA RLSHSALDLA GSTTRVNWSA SDYKPVSTTS
101: PNTNFGSLDS IEPSKLVPDK GQNVFNTTIM SEIIDRTMKK HTDTLLHVME GVSARLSQLE TRTHNLENLV DDLKVSVDNS HGSTDGKMRQ LKNILVEVQS
201: GVQLLKDKQE ILEAQLSKHQ VSNQHAKTHS LHVDPTAQSP APVPMQQFPL TSFPQPPSST AAPSQPPSSQ LPPQLPTQFS SQQEPYCPPP SHPQPPPSNP
301: PPYQAPQTQT PHQPSYQSPP QQPQYPQQPP PSSGYNPEEQ PPYQMQSYPP NPPRQQPPAG STPSQQFYNP PQPQPSMYDG AGGRSNSGFP SGYLSEPYTY
401: SGSPMSSAKP PHISSNGTGY PQLSNSRPLP HALPMVSAVS SGGGSSSPRS ESRAPIDDVI DRVTTMGFPR DQVRATVRKL TENGQAVDLN VVLDKLMNEG
501: GAPPGGFFGG R
101: PNTNFGSLDS IEPSKLVPDK GQNVFNTTIM SEIIDRTMKK HTDTLLHVME GVSARLSQLE TRTHNLENLV DDLKVSVDNS HGSTDGKMRQ LKNILVEVQS
201: GVQLLKDKQE ILEAQLSKHQ VSNQHAKTHS LHVDPTAQSP APVPMQQFPL TSFPQPPSST AAPSQPPSSQ LPPQLPTQFS SQQEPYCPPP SHPQPPPSNP
301: PPYQAPQTQT PHQPSYQSPP QQPQYPQQPP PSSGYNPEEQ PPYQMQSYPP NPPRQQPPAG STPSQQFYNP PQPQPSMYDG AGGRSNSGFP SGYLSEPYTY
401: SGSPMSSAKP PHISSNGTGY PQLSNSRPLP HALPMVSAVS SGGGSSSPRS ESRAPIDDVI DRVTTMGFPR DQVRATVRKL TENGQAVDLN VVLDKLMNEG
501: GAPPGGFFGG R
Arabidopsis Description
Proline-rich receptor-like kinase, putative (DUF1421) [Source:UniProtKB/TrEMBL;Acc:F4J3J5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.