Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g035240.1.1 | Tomato | nucleus | 61.73 | 65.11 |
| PGSC0003DMT400032802 | Potato | nucleus | 52.5 | 50.28 |
| VIT_14s0066g00800.t01 | Wine grape | nucleus | 46.92 | 43.34 |
| KRG93222 | Soybean | nucleus | 42.69 | 38.41 |
| KRH56551 | Soybean | nucleus | 41.92 | 38.05 |
| AT3G01560.1 | Thale cress | nucleus | 36.15 | 36.79 |
| TraesCS1A01G113700.1 | Wheat | nucleus | 38.85 | 35.19 |
| KXG31759 | Sorghum | nucleus | 39.62 | 35.03 |
| TraesCS1D01G115300.1 | Wheat | nucleus | 38.27 | 34.67 |
| CDX85594 | Canola | nucleus | 32.12 | 34.29 |
| TraesCS1B01G134000.1 | Wheat | nucleus | 38.08 | 34.26 |
| GSMUA_Achr6P03180_001 | Banana | nucleus | 35.77 | 33.82 |
| Zm00001d039686_P001 | Maize | nucleus | 36.92 | 33.8 |
| Zm00001d008708_P001 | Maize | extracellular | 36.54 | 33.75 |
| EES19114 | Sorghum | nucleus | 37.69 | 33.68 |
| CDX91045 | Canola | nucleus | 31.35 | 33.54 |
| HORVU1Hr1G025020.4 | Barley | nucleus | 36.73 | 33.45 |
| Os01t0169900-01 | Rice | plasma membrane | 37.31 | 33.45 |
| Os05t0169400-01 | Rice | plastid | 34.42 | 33.4 |
| Bra023474.1-P | Field mustard | nucleus | 34.42 | 33.4 |
| AT5G14540.1 | Thale cress | nucleus | 34.81 | 33.09 |
| TraesCS3D01G093200.1 | Wheat | nucleus | 36.54 | 32.26 |
| GSMUA_Achr2P14190_001 | Banana | nucleus | 33.08 | 31.97 |
| HORVU3Hr1G016420.3 | Barley | cytosol, nucleus | 35.96 | 31.43 |
| TraesCS3A01G092900.1 | Wheat | nucleus | 36.15 | 31.18 |
| TraesCS3B01G108100.1 | Wheat | nucleus | 35.58 | 30.68 |
| PGSC0003DMT400034191 | Potato | nucleus | 18.65 | 17.7 |
| PGSC0003DMT400047245 | Potato | nucleus | 18.27 | 17.69 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400072130 | EnsemblPlantsGene:PGSC0003DMG400028065 | InterPro:DUF1421 | ncoils:Coil | PANTHER:PTHR31805 | PANTHER:PTHR31805:SF2 |
| PFAM:PF07223 | PGSC:PGSC0003DMG400028065 | SEG:seg | UniParc:UPI000295696E | UniProt:M1CPR5 | MapMan:35.2 |
Description
Proline-rich protein [Source:PGSC_GENE;Acc:PGSC0003DMG400028065]
Coordinates
chr12:-:38360485..38367849
Molecular Weight (calculated)
56851.9 Da
IEP (calculated)
6.278
GRAVY (calculated)
-0.742
Length
520 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKQIMDLSS SLSNNDFINL HDDQHHITGG VKGENHPVRP IESFPNYNID WIQVDGARAW NSADTKTNTN YSSADSIEPA KLIVEKDLST IDASLLSEID
101: HTVKKYADNL LHAIESVSAR LSQLETRSHQ IEAFVVELKL SVDNNHGNTD GKLRLVENIL REVQDGVQVI KNKQDIMDTQ LQLTKLQVPK FEQEIDTHNT
201: THVDSAHHRA SAPLQSHQQF PPVALAQSPS PLPPPNAPPP PLQQKIPPQV ELQDQFPHNP IPSGTQRETY FQSTGQAPEN SSQQYQQSAP HQQRQTSIPP
301: PPHQQYQPSP SSLYSQPPPP SQTHPPLPSV NPSQPQPPLI HHPEERHFIA SQTYPLANTS QSPSHPSSGV PVSHQFYAAP PNMFEPPSSR QGPGFASAYG
401: PSTEPGESYP YSGSTVQYGS GYPLKSQQLA SPSMGQSGGN GYPQLPTARI LPQALPTASA VSSGSSSPRT GSRVPIDDVV DKVTNMGFPR DQVRATVRRL
501: TENGQSVDLN VVLDKLMNGG
101: HTVKKYADNL LHAIESVSAR LSQLETRSHQ IEAFVVELKL SVDNNHGNTD GKLRLVENIL REVQDGVQVI KNKQDIMDTQ LQLTKLQVPK FEQEIDTHNT
201: THVDSAHHRA SAPLQSHQQF PPVALAQSPS PLPPPNAPPP PLQQKIPPQV ELQDQFPHNP IPSGTQRETY FQSTGQAPEN SSQQYQQSAP HQQRQTSIPP
301: PPHQQYQPSP SSLYSQPPPP SQTHPPLPSV NPSQPQPPLI HHPEERHFIA SQTYPLANTS QSPSHPSSGV PVSHQFYAAP PNMFEPPSSR QGPGFASAYG
401: PSTEPGESYP YSGSTVQYGS GYPLKSQQLA SPSMGQSGGN GYPQLPTARI LPQALPTASA VSSGSSSPRT GSRVPIDDVV DKVTNMGFPR DQVRATVRRL
501: TENGQSVDLN VVLDKLMNGG
001: MQSFDLIKSA LFSDKQIMDL MNDNSNNSQD GDHQNYRVGD NGLESKKEAI FPSYDFQPMR PNASAGLSHH ALDLAGSVNS TAARVWDASD PKPVSASSAR
101: SYGSMDSLEP SKLFAEKDRN SPESAIISAI DRTMKAHADK LLHVMEGVSA RLTQLETRTR DLENLVDDVK VSVGNSHGKT DGKLRQLENI MLEVQNGVQL
201: LKDKQEIVEA QLQLSKLQLS KVNQQPETHS THVEPTAQPP ASLPQPPASA AAPPSLTQQG LPPQQFIQPP ASQHGLSPPS LQLPQLPNQF SPQQEPYFPP
301: SGQSQPPPTI QPPYQPPPPT QSLHQPPYQP PPQQPQYPQQ PPPQLQHPSG YNPEEPPYPQ QSYPPNPPRQ PPSHPPPGSA PSQQYYNAPP TPPSMYDGPG
401: GRSNSGFPSG YSPESYPYTG PPSQYGNTPS VKPTHQSGSG SGAYPQLPMA RPLPQGLPMA SAISSGGSGG GSDSPRSGNR APVDDVIDKV VSMGFPRDQV
501: RGTVRTLTEN GQAVDLNVVL DKLMNGDRGA MMQQQQQQPP RGWFGGR
101: SYGSMDSLEP SKLFAEKDRN SPESAIISAI DRTMKAHADK LLHVMEGVSA RLTQLETRTR DLENLVDDVK VSVGNSHGKT DGKLRQLENI MLEVQNGVQL
201: LKDKQEIVEA QLQLSKLQLS KVNQQPETHS THVEPTAQPP ASLPQPPASA AAPPSLTQQG LPPQQFIQPP ASQHGLSPPS LQLPQLPNQF SPQQEPYFPP
301: SGQSQPPPTI QPPYQPPPPT QSLHQPPYQP PPQQPQYPQQ PPPQLQHPSG YNPEEPPYPQ QSYPPNPPRQ PPSHPPPGSA PSQQYYNAPP TPPSMYDGPG
401: GRSNSGFPSG YSPESYPYTG PPSQYGNTPS VKPTHQSGSG SGAYPQLPMA RPLPQGLPMA SAISSGGSGG GSDSPRSGNR APVDDVIDKV VSMGFPRDQV
501: RGTVRTLTEN GQAVDLNVVL DKLMNGDRGA MMQQQQQQPP RGWFGGR
Arabidopsis Description
AT5G14540 protein [Source:UniProtKB/TrEMBL;Acc:B9DHK3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.