Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G092900.1 | Wheat | nucleus | 93.11 | 91.87 |
| TraesCS3B01G108100.1 | Wheat | nucleus | 89.92 | 88.72 |
| TraesCS3D01G093200.1 | Wheat | nucleus | 87.23 | 88.12 |
| Os01t0169900-01 | Rice | plasma membrane | 62.86 | 64.48 |
| Zm00001d008708_P001 | Maize | extracellular | 58.66 | 61.99 |
| Zm00001d039686_P001 | Maize | nucleus | 58.49 | 61.27 |
| KXG31759 | Sorghum | nucleus | 58.66 | 59.35 |
| HORVU1Hr1G025020.4 | Barley | nucleus | 52.94 | 55.17 |
| GSMUA_Achr6P03180_001 | Banana | nucleus | 38.15 | 41.27 |
| VIT_14s0066g00800.t01 | Wine grape | nucleus | 37.31 | 39.43 |
| GSMUA_Achr2P14190_001 | Banana | nucleus | 35.46 | 39.22 |
| KRH56551 | Soybean | nucleus | 37.14 | 38.57 |
| PGSC0003DMT400032802 | Potato | nucleus | 34.45 | 37.75 |
| KRG93222 | Soybean | nucleus | 36.13 | 37.2 |
| Solyc02g086520.2.1 | Tomato | nucleus | 33.95 | 37.06 |
| VIT_17s0000g08970.t01 | Wine grape | nucleus | 28.4 | 36.03 |
| PGSC0003DMT400072130 | Potato | nucleus | 31.43 | 35.96 |
| CDX91045 | Canola | nucleus | 28.74 | 35.19 |
| AT3G01560.1 | Thale cress | nucleus | 30.08 | 35.03 |
| AT5G14540.1 | Thale cress | nucleus | 32.1 | 34.92 |
| CDX85594 | Canola | nucleus | 28.4 | 34.7 |
| Solyc12g035240.1.1 | Tomato | nucleus | 28.57 | 34.48 |
| Bra023474.1-P | Field mustard | nucleus | 30.42 | 33.77 |
| HORVU3Hr1G072520.1 | Barley | nucleus | 21.34 | 21.06 |
| HORVU1Hr1G086930.4 | Barley | nucleus | 14.96 | 16.76 |
Protein Annotations
| EMBL:AK376172 | EnsemblPlants:HORVU3Hr1G016420.3 | EnsemblPlantsGene:HORVU3Hr1G016420 | InterPro:DUF1421 | ncoils:Coil | PANTHER:PTHR31805 |
| PANTHER:PTHR31805:SF12 | PFAM:PF07223 | SEG:seg | UniParc:UPI0002008BF0 | UniProt:F2EJ45 | MapMan:35.2 |
Description
Predicted protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:F2EJ45]
Coordinates
chrchr3H:-:39930882..39934672
Molecular Weight (calculated)
63373.3 Da
IEP (calculated)
6.235
GRAVY (calculated)
-0.765
Length
595 amino acids
Sequence
(BLAST)
(BLAST)
001: FMDKQILGLA ASAAPSPPPA GGGSELLDLM GPDPQEESED GLRRRHHRSA NGTATDVLPS YDFQPMRTAG AAPAAAPHSW GSLDSNSKAA SVSAPASSPY
101: NLKSAGILEN RVPKNVNHEE DRSNFGLVTI ADIDRTMKKY SDNLLYALEG VSSRLSQLEG RTHHLESSVD EFKLTIGNYN GSTDGKLRQL ENMLREVQAG
201: VQIMRDKQEI VETQLHLAKL QIPKNETQSS ENSGVGQADS LHQSVAPQQA GVPPQHQPQT FPALPAPNAP PPPPTLQSQP PAQFLGHSSA PSVPALPQEP
301: YYTPSAQPTE AIHQQYQAPP VPQPQAPPAP QQQYQAPPVP QPQAPPAPPQ QYQAPPVPQA HAPPAPPQQY QAPPVPQAQA PPAPPQQYQT PSQFSQYSQQ
401: PQSTNANPSS PLAHPASQHT EYTPSHSYPP NVRTPSAYMP PQNESAPPFY GQNPSMYEPP AVRPNSGPPP SYGAPGYGPQ GGSSFSETYG YTGSPSYRGN
501: TGMKPTPFAP SGPSSGGSGN SYSTRLPTAW ILPQAEPVSS SPTAASGNRV ALDDVVEKVA TMGFSREQVR ATVRRLTENG QNVDLNVVLD KLMNG
101: NLKSAGILEN RVPKNVNHEE DRSNFGLVTI ADIDRTMKKY SDNLLYALEG VSSRLSQLEG RTHHLESSVD EFKLTIGNYN GSTDGKLRQL ENMLREVQAG
201: VQIMRDKQEI VETQLHLAKL QIPKNETQSS ENSGVGQADS LHQSVAPQQA GVPPQHQPQT FPALPAPNAP PPPPTLQSQP PAQFLGHSSA PSVPALPQEP
301: YYTPSAQPTE AIHQQYQAPP VPQPQAPPAP QQQYQAPPVP QPQAPPAPPQ QYQAPPVPQA HAPPAPPQQY QAPPVPQAQA PPAPPQQYQT PSQFSQYSQQ
401: PQSTNANPSS PLAHPASQHT EYTPSHSYPP NVRTPSAYMP PQNESAPPFY GQNPSMYEPP AVRPNSGPPP SYGAPGYGPQ GGSSFSETYG YTGSPSYRGN
501: TGMKPTPFAP SGPSSGGSGN SYSTRLPTAW ILPQAEPVSS SPTAASGNRV ALDDVVEKVA TMGFSREQVR ATVRRLTENG QNVDLNVVLD KLMNG
001: MNTCQFMDKQ IMDLSSSSSL PSTDFIDLMN NHDGDDHQKK QVIGDNGLDS KKEVIVPSYD FHPIRPTTAA RLSHSALDLA GSTTRVNWSA SDYKPVSTTS
101: PNTNFGSLDS IEPSKLVPDK GQNVFNTTIM SEIIDRTMKK HTDTLLHVME GVSARLSQLE TRTHNLENLV DDLKVSVDNS HGSTDGKMRQ LKNILVEVQS
201: GVQLLKDKQE ILEAQLSKHQ VSNQHAKTHS LHVDPTAQSP APVPMQQFPL TSFPQPPSST AAPSQPPSSQ LPPQLPTQFS SQQEPYCPPP SHPQPPPSNP
301: PPYQAPQTQT PHQPSYQSPP QQPQYPQQPP PSSGYNPEEQ PPYQMQSYPP NPPRQQPPAG STPSQQFYNP PQPQPSMYDG AGGRSNSGFP SGYLSEPYTY
401: SGSPMSSAKP PHISSNGTGY PQLSNSRPLP HALPMVSAVS SGGGSSSPRS ESRAPIDDVI DRVTTMGFPR DQVRATVRKL TENGQAVDLN VVLDKLMNEG
501: GAPPGGFFGG R
101: PNTNFGSLDS IEPSKLVPDK GQNVFNTTIM SEIIDRTMKK HTDTLLHVME GVSARLSQLE TRTHNLENLV DDLKVSVDNS HGSTDGKMRQ LKNILVEVQS
201: GVQLLKDKQE ILEAQLSKHQ VSNQHAKTHS LHVDPTAQSP APVPMQQFPL TSFPQPPSST AAPSQPPSSQ LPPQLPTQFS SQQEPYCPPP SHPQPPPSNP
301: PPYQAPQTQT PHQPSYQSPP QQPQYPQQPP PSSGYNPEEQ PPYQMQSYPP NPPRQQPPAG STPSQQFYNP PQPQPSMYDG AGGRSNSGFP SGYLSEPYTY
401: SGSPMSSAKP PHISSNGTGY PQLSNSRPLP HALPMVSAVS SGGGSSSPRS ESRAPIDDVI DRVTTMGFPR DQVRATVRKL TENGQAVDLN VVLDKLMNEG
501: GAPPGGFFGG R
Arabidopsis Description
Proline-rich receptor-like kinase, putative (DUF1421) [Source:UniProtKB/TrEMBL;Acc:F4J3J5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.