Factsheet for Bra022095.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra002368.1-P
Bra006595.1-P
Bra018296.1-P
Bra033467.1-P
Bra039723.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G04570.1	Bra000214.1-P	AT2G41090.1	17360592
AT4G04570.1	Bra000214.1-P	AT2G41100.1	17360592
AT4G04570.1	Bra018296.1-P	AT3G51920.1	17360592
AT4G04570.1	Bra033467.1-P	AT3G51920.1	17360592
AT4G04570.1	Bra039723.1-P	AT4G14640.1	17360592
AT4G04570.1	Bra002368.1-P	AT5G21274.1	17360592
AT4G04570.1	Bra006595.1-P	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37174	Canola	plasma membrane	99.85	99.85
Bra018496.1-P	Field mustard	cytosol	71.25	84.88
AT4G04540.1	Thale cress	plasma membrane	75.99	75.42
Bra029470.1-P	Field mustard	plasma membrane	70.8	72.91
AT4G04570.1	Thale cress	plasma membrane	70.8	70.8
Bra029499.1-P	Field mustard	plasma membrane	70.8	70.69
Bra018493.1-P	Field mustard	plasma membrane	68.81	69.02
Bra018492.1-P	Field mustard	cytosol	54.89	68.77
Bra000797.1-P	Field mustard	plasma membrane	63.46	68.26
Bra000796.1-P	Field mustard	plasma membrane	63.0	67.76
Bra017551.1-P	Field mustard	plasma membrane	61.93	67.05
Bra017552.1-P	Field mustard	plasma membrane	63.61	65.2
Bra029500.1-P	Field mustard	plasma membrane	64.37	64.37
Bra000799.1-P	Field mustard	plasma membrane	58.1	57.93
Bra000798.1-P	Field mustard	extracellular, plasma membrane	24.01	57.09
Bra029495.1-P	Field mustard	plasma membrane	55.81	56.24
Bra000800.1-P	Field mustard	plasma membrane	54.59	55.01
Bra029496.1-P	Field mustard	plasma membrane	51.83	53.22
Bra017549.1-P	Field mustard	extracellular	7.19	52.22
Bra000754.1-P	Field mustard	cytosol	21.87	39.94
Bra029425.1-P	Field mustard	cytosol	11.62	35.85

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.17	MapMan:18.4.1.24.1	Gene3D:3.30.200.20	Gene3D:3.30.430.20	EnsemblPlantsGene:Bra022095
EnsemblPlants:Bra022095.1	EnsemblPlants:Bra022095.1-P	InterPro:GNK2	InterPro:GNK2_sf	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002902	InterPro:IPR038408
InterPro:Kinase-like_dom_sf	UniProt:M4DZZ8	PFAM:PF01657	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS51473	PANTHER:PTHR27002	PANTHER:PTHR27002:SF348	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0002546120	SEG:seg	:	:	:	:

Description

AT4G04540 (E=6e-269) | protein kinase family protein

Coordinates

chrA02:-:19243950..19246754

Molecular Weight (calculated)

73334.5 Da

IEP (calculated)

6.259

GRAVY (calculated)

-0.229

Length

654 amino acids

Sequence
(BLAST)

001: MGKSFALVII LLSFLLLLVL QNLEVVNAVG CTGSFYNENS TYVQNRDDIF STLPDKVIAN GGFYNSSLGN SPNRVYALVL CQRGYEQQDC FNCVLSATRG
101: IKKDCPTRMN SYTWDKDVED NVSCLVRSSI HSTFGSLELE PAVRYPSPDG IDPSKNMTLF EQEWDGMVNR TVEAATGAET SSVLKYHGAI EAEFTEFENV
201: YMLMQCTPDI TSQDCNRCLR ACVTLFKNQF WGRRGGEVNR PSCFFRWDFY TFHGAFGNVT RLPSPPAQEK GSSATDKKGR STRSWVTIAI FVVLTFINVF
301: VSISLIKFFA RRRKSNNGIN VDREEHSESD GQHMLRFNLG MILTATNNFS SENKLGQGGF GTVHKGILPN GQEIAVKRLS KGSGQGDTEF KNEVSLLTRL
401: QHRNLVKLLG FCSEGDEEIL VYELVHNSSL DHFIFDEERR SLLSWELRFR IIEGIARGLL YLHEDSQLKI IHRDLKASNI LLDAEMNPKV ADFGTARLFE
501: AEETRAETRR IAGTRGYMAP EYLNHGKISA KSDVYSFGVM LLEMISGERN NSFEGEGLAA FAWKRWVEGK AEAVIDPLLM KDPINEIMKL IQIGLLCVQE
601: NAAKRPTMRL VIVWFGSDTI IIPLPKAPAM SGSQSQSEDG TMSISNDSTE LSCR

Best Arabidopsis Sequence Match ( AT4G04540.1 )
(BLAST)

001: MGKYSVLMIF IASSLLIVLQ NVEIVNAVGC TGSFFNGNSS YAQNRRDLFS TLPNKVVTNG GFYNSSLGKS PNIVHAVALC GRGYEQQACI RCVDSAIQGI
101: LTTTSCLNRV DSFTWDKDEE DNVSCLVSTS NHSTFGNLEL RPSVRYQSPN SIEPSKNMTL FEQEWNAMAN RTVESATEAE TSSVLKYYSA EKAEFTEFPN
201: VYMLMQCTPD ITSQDCKTCL GECVTLFKEQ VWGRQGGEVY RPSCFFRWDL YAFHGAFDNV TRVPAPPRPQ AQGNESSITK KKGRSIGYGG IIAIVVVLTF
301: INILVFIGYI KVYGRRKESY NKINVGSAEY SDSDGQFMLR FDLGMVLAAT DEFSSENTLG QGGFGTVYKG TLLNGQEVAV KRLTKGSGQG DIEFKNEVSL
401: LTRLQHRNLV KLLGFCNEGD EQILVYEFVP NSSLDHFIFD DEKRSLLTWE MRYRIIEGIA RGLLYLHEDS QLKIIHRDLK ASNILLDAEM NPKVADFGTA
501: RLFDSDETRA ETKRIAGTRG YMAPEYLNHG QISAKSDVYS FGVMLLEMIS GERNNSFEGE GLAAFAWKRW VEGKPEIIID PFLIEKPRNE IIKLIQIGLL
601: CVQENPTKRP TMSSVIIWLG SETNIIPLPK APAFTGSRSQ SEIGAMSMSD DVFTELSCR

Arabidopsis Description

CRK39Putative cysteine-rich receptor-like protein kinase 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYS7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.