Factsheet for AT4G04540.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 5
plastid 1
vacuole 4
plasma membrane 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97323	Canola	cytosol	68.44	82.15
CDY33543	Canola	cytosol	68.44	82.15
Bra018496.1-P	Field mustard	cytosol	68.29	81.97
AT4G04570.1	Thale cress	plasma membrane	78.76	79.36
CDY51854	Canola	plasma membrane	76.33	76.91
CDY37174	Canola	plasma membrane	75.57	76.15
Bra022095.1-P	Field mustard	plasma membrane	75.42	75.99
AT4G04510.2	Thale cress	plasma membrane	59.48	60.31
AT4G04490.1	Thale cress	plasma membrane	57.36	57.45
AT4G04500.1	Thale cress	plasma membrane	56.15	57.28
AT4G11890.3	Thale cress	cytosol	21.55	40.11

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.17	MapMan:18.4.1.24.1	Gene3D:3.30.200.20	Gene3D:3.30.430.20	EntrezGene:825785
ProteinID:AAD29766.1	ProteinID:AEE82397.1	EMBL:AF074021	ArrayExpress:AT4G04540	EnsemblPlantsGene:AT4G04540	RefSeq:AT4G04540
TAIR:AT4G04540	RefSeq:AT4G04540-TAIR-G	EnsemblPlants:AT4G04540.1	TAIR:AT4G04540.1	ProteinID:CAB77922.1	Symbol:CRK39
InterPro:GNK2	InterPro:GNK2_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR002902	InterPro:IPR038408	InterPro:Kinase-like_dom_sf	RefSeq:NP_192363.1	PFAM:PF00069	PFAM:PF01657
PO:PO:0000293	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51473	PANTHER:PTHR27002
PANTHER:PTHR27002:SF348	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q9SYS7	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00000488FF	SEG:seg	:

Description

CRK39Putative cysteine-rich receptor-like protein kinase 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYS7]

Coordinates

chr4:+:2259498..2262320

Molecular Weight (calculated)

73572.8 Da

IEP (calculated)

5.475

GRAVY (calculated)

-0.197

Length

659 amino acids

Sequence
(BLAST)

001: MGKYSVLMIF IASSLLIVLQ NVEIVNAVGC TGSFFNGNSS YAQNRRDLFS TLPNKVVTNG GFYNSSLGKS PNIVHAVALC GRGYEQQACI RCVDSAIQGI
101: LTTTSCLNRV DSFTWDKDEE DNVSCLVSTS NHSTFGNLEL RPSVRYQSPN SIEPSKNMTL FEQEWNAMAN RTVESATEAE TSSVLKYYSA EKAEFTEFPN
201: VYMLMQCTPD ITSQDCKTCL GECVTLFKEQ VWGRQGGEVY RPSCFFRWDL YAFHGAFDNV TRVPAPPRPQ AQGNESSITK KKGRSIGYGG IIAIVVVLTF
301: INILVFIGYI KVYGRRKESY NKINVGSAEY SDSDGQFMLR FDLGMVLAAT DEFSSENTLG QGGFGTVYKG TLLNGQEVAV KRLTKGSGQG DIEFKNEVSL
401: LTRLQHRNLV KLLGFCNEGD EQILVYEFVP NSSLDHFIFD DEKRSLLTWE MRYRIIEGIA RGLLYLHEDS QLKIIHRDLK ASNILLDAEM NPKVADFGTA
501: RLFDSDETRA ETKRIAGTRG YMAPEYLNHG QISAKSDVYS FGVMLLEMIS GERNNSFEGE GLAAFAWKRW VEGKPEIIID PFLIEKPRNE IIKLIQIGLL
601: CVQENPTKRP TMSSVIIWLG SETNIIPLPK APAFTGSRSQ SEIGAMSMSD DVFTELSCR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.