Factsheet for Bra000796.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
plasma membrane 7
extracellular 4
endoplasmic reticulum 4
vacuole 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90866	Canola	plasma membrane	97.04	90.91
Bra000797.1-P	Field mustard	plasma membrane	77.63	77.63
Bra017552.1-P	Field mustard	plasma membrane	75.82	72.26
Bra017551.1-P	Field mustard	plasma membrane	71.55	72.02
Bra018492.1-P	Field mustard	cytosol	58.22	67.82
Bra018496.1-P	Field mustard	cytosol	60.69	67.21
Bra000798.1-P	Field mustard	extracellular, plasma membrane	30.1	66.55
Bra029470.1-P	Field mustard	plasma membrane	68.42	65.51
Bra029499.1-P	Field mustard	plasma membrane	70.56	65.5
Bra018493.1-P	Field mustard	plasma membrane	70.07	65.34
Bra022095.1-P	Field mustard	plasma membrane	67.76	63.0
Bra029500.1-P	Field mustard	plasma membrane	63.65	59.17
Bra000799.1-P	Field mustard	plasma membrane	57.57	53.35
Bra000800.1-P	Field mustard	plasma membrane	55.92	52.39
Bra017549.1-P	Field mustard	extracellular	7.73	52.22
Bra029495.1-P	Field mustard	plasma membrane	55.1	51.62
Bra029496.1-P	Field mustard	plasma membrane	51.32	48.98
Bra000754.1-P	Field mustard	cytosol	21.55	36.59
Bra029425.1-P	Field mustard	cytosol	11.02	31.6

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.24.1	Gene3D:3.30.200.20	Gene3D:3.30.430.20	EnsemblPlantsGene:Bra000796	EnsemblPlants:Bra000796.1
EnsemblPlants:Bra000796.1-P	InterPro:GNK2	InterPro:GNK2_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR002902	InterPro:IPR038408	InterPro:Kinase-like_dom_sf	UniProt:M4C9B7	PFAM:PF00069	PFAM:PF01657
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51473	PANTHER:PTHR27002	PANTHER:PTHR27002:SF348
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM
UniParc:UPI00025404A9	SEG:seg	:	:	:	:

Description

AT4G04540 (E=2e-159) | protein kinase family protein

Coordinates

chrA03:+:13165705..13168694

Molecular Weight (calculated)

67584.0 Da

IEP (calculated)

6.821

GRAVY (calculated)

-0.180

Length

608 amino acids

Sequence
(BLAST)

001: MGSFPALMII LASSLLTVLE VVNGAKCYGS SNSNSSYSRN RDNLFSTLAN NVVTNGGVYN SSLGQYPNKV YVLGLCARGY EPKPCISCVE KLTLETQTGC
101: GSIMKSFIWD SDDGDRVSCL VRSSNHSFGN LELDPPVIGP SPNHFAQSVN MTLFMQQWEY TVNKTLEAAT KADTSSMHKY YSAVHAQLTE FSDVYMMMQC
201: TPDITSQDCK QCLEDSVKYF REQFRGKTGG MASFPSCLFR WDLYSFYGAF GHVTRVPALP LLQAPKKGSS VPEKKGCTLE YSDSDGHFML RFDLSMIILA
301: TADFSPENKL GQGGFGTVYK GILLNGKEIA VKRLTRGSEG GVEFKNEVSL LTRLQHKNLV KLLGFCNEGD EEILVYEFVP NSSLDRFIFD EEKRQLLTWE
401: VRFKIIEGIA RGLVYLHEDS QLKIIHRDLK ASNILLDAEM NPKVADFGTA RLFDTDETRA ETQRIAGTRG YMAPEYLNHG QISAKCDVYS FGVVLLEMIS
501: GRRNNSFVGE GIVAFSWKRW VEGKPEIIID PLLVKKPSSE IIKLIQTGLL CAQQNPTKRP TMSTVIVWLG SETITIPLPK APAFTASRSQ SEDGTTSMSN
601: VLTELSCR

Best Arabidopsis Sequence Match ( AT4G04540.1 )
(BLAST)

001: MGKYSVLMIF IASSLLIVLQ NVEIVNAVGC TGSFFNGNSS YAQNRRDLFS TLPNKVVTNG GFYNSSLGKS PNIVHAVALC GRGYEQQACI RCVDSAIQGI
101: LTTTSCLNRV DSFTWDKDEE DNVSCLVSTS NHSTFGNLEL RPSVRYQSPN SIEPSKNMTL FEQEWNAMAN RTVESATEAE TSSVLKYYSA EKAEFTEFPN
201: VYMLMQCTPD ITSQDCKTCL GECVTLFKEQ VWGRQGGEVY RPSCFFRWDL YAFHGAFDNV TRVPAPPRPQ AQGNESSITK KKGRSIGYGG IIAIVVVLTF
301: INILVFIGYI KVYGRRKESY NKINVGSAEY SDSDGQFMLR FDLGMVLAAT DEFSSENTLG QGGFGTVYKG TLLNGQEVAV KRLTKGSGQG DIEFKNEVSL
401: LTRLQHRNLV KLLGFCNEGD EQILVYEFVP NSSLDHFIFD DEKRSLLTWE MRYRIIEGIA RGLLYLHEDS QLKIIHRDLK ASNILLDAEM NPKVADFGTA
501: RLFDSDETRA ETKRIAGTRG YMAPEYLNHG QISAKSDVYS FGVMLLEMIS GERNNSFEGE GLAAFAWKRW VEGKPEIIID PFLIEKPRNE IIKLIQIGLL
601: CVQENPTKRP TMSSVIIWLG SETNIIPLPK APAFTGSRSQ SEIGAMSMSD DVFTELSCR

Arabidopsis Description

CRK39Putative cysteine-rich receptor-like protein kinase 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYS7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.