Factsheet for Bra018492.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97327	Canola	plasma membrane	100.0	79.94
Bra018496.1-P	Field mustard	cytosol	72.22	68.67
Bra018493.1-P	Field mustard	plasma membrane	81.8	65.49
Bra029470.1-P	Field mustard	plasma membrane	75.48	62.05
Bra017551.1-P	Field mustard	plasma membrane	67.62	58.44
Bra000796.1-P	Field mustard	plasma membrane	67.82	58.22
Bra029499.1-P	Field mustard	plasma membrane	72.8	58.02
Bra000797.1-P	Field mustard	plasma membrane	67.24	57.73
Bra017552.1-P	Field mustard	plasma membrane	69.73	57.05
Bra022095.1-P	Field mustard	plasma membrane	68.77	54.89
Bra029500.1-P	Field mustard	plasma membrane	65.9	52.6
Bra029495.1-P	Field mustard	plasma membrane	58.62	47.15
Bra000799.1-P	Field mustard	plasma membrane	58.81	46.8
Bra000800.1-P	Field mustard	plasma membrane	54.79	44.07
Bra029496.1-P	Field mustard	plasma membrane	51.92	42.54
Bra000798.1-P	Field mustard	extracellular, plasma membrane	21.65	41.09
Bra000754.1-P	Field mustard	cytosol	24.14	35.2
Bra029425.1-P	Field mustard	cytosol	13.22	32.55
Bra017549.1-P	Field mustard	extracellular	1.15	6.67

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.17	Gene3D:3.30.200.20	Gene3D:3.30.430.20	EnsemblPlantsGene:Bra018492	EnsemblPlants:Bra018492.1
EnsemblPlants:Bra018492.1-P	InterPro:GNK2	InterPro:GNK2_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002902	InterPro:IPR038408	InterPro:Kinase-like_dom_sf
UniProt:M4DPQ1	PFAM:PF00069	PFAM:PF01657	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS51473	PANTHER:PTHR27002	PANTHER:PTHR27002:SF348	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0002548109	:	:

Description

AT4G04540 (E=3e-169) | protein kinase family protein

Coordinates

chrA05:+:8646719..8649947

Molecular Weight (calculated)

59164.4 Da

IEP (calculated)

8.087

GRAVY (calculated)

-0.198

Length

522 amino acids

Sequence
(BLAST)

001: MDSFQWDKDD VDDRVSCLVR SSNQAAFKKL ELRPADIHPN PNSIEPSKNM TLFTKQWEAT VNRTIKVATE SNTSSLLQYF GAVKAEFTEF PNVYMLMQCM
101: PDITSRECMT CLEKCVAYFK VMYWGSRGGE VSRPSCVFRW DLYSFRSAFD NLTIFHAPPR VKSQAQPPTN DKKGRSIRYG GIITIVVPCF INLLVFIGLI
201: KVYGPRRKSK NGINEYSDAD GQFMLRFDLG IIITATSDFS SENKLGQGGF GTVHKGILLN GREIAVKRLI RGLEGGMEFK NEVSLLTRLQ HKNLVKLLGF
301: CNERDEEILV YEFVPNSSLD HFIFDEEKRK LLTWEVRFKI IEGVARGLVY LHEDSQLKII HRDLKASNIL LDAEMNPKVA DFGTARLFDT DETRAETKRI
401: AGTRFGVVLL EIISGKRNNS FEGEGIASFT WKRWAEGRPE IIIDPFLVEN SSNEIVKLIQ IGLLCVQENA TKRPTMSSVI VWLGSENITI ALPRAPAFTM
501: IKSPSEDCTM SMSNVFTELS SR

Best Arabidopsis Sequence Match ( AT4G04540.1 )
(BLAST)

001: MGKYSVLMIF IASSLLIVLQ NVEIVNAVGC TGSFFNGNSS YAQNRRDLFS TLPNKVVTNG GFYNSSLGKS PNIVHAVALC GRGYEQQACI RCVDSAIQGI
101: LTTTSCLNRV DSFTWDKDEE DNVSCLVSTS NHSTFGNLEL RPSVRYQSPN SIEPSKNMTL FEQEWNAMAN RTVESATEAE TSSVLKYYSA EKAEFTEFPN
201: VYMLMQCTPD ITSQDCKTCL GECVTLFKEQ VWGRQGGEVY RPSCFFRWDL YAFHGAFDNV TRVPAPPRPQ AQGNESSITK KKGRSIGYGG IIAIVVVLTF
301: INILVFIGYI KVYGRRKESY NKINVGSAEY SDSDGQFMLR FDLGMVLAAT DEFSSENTLG QGGFGTVYKG TLLNGQEVAV KRLTKGSGQG DIEFKNEVSL
401: LTRLQHRNLV KLLGFCNEGD EQILVYEFVP NSSLDHFIFD DEKRSLLTWE MRYRIIEGIA RGLLYLHEDS QLKIIHRDLK ASNILLDAEM NPKVADFGTA
501: RLFDSDETRA ETKRIAGTRG YMAPEYLNHG QISAKSDVYS FGVMLLEMIS GERNNSFEGE GLAAFAWKRW VEGKPEIIID PFLIEKPRNE IIKLIQIGLL
601: CVQENPTKRP TMSSVIIWLG SETNIIPLPK APAFTGSRSQ SEIGAMSMSD DVFTELSCR

Arabidopsis Description

CRK39Putative cysteine-rich receptor-like protein kinase 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYS7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.