Factsheet for Bra029470.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16698	Canola	extracellular, plasma membrane	44.25	97.57
Bra029499.1-P	Field mustard	plasma membrane	78.43	76.03
Bra018492.1-P	Field mustard	cytosol	62.05	75.48
Bra018496.1-P	Field mustard	cytosol	63.15	73.04
Bra018493.1-P	Field mustard	plasma membrane	73.54	71.63
Bra022095.1-P	Field mustard	plasma membrane	72.91	70.8
Bra017551.1-P	Field mustard	plasma membrane	65.51	68.87
Bra000796.1-P	Field mustard	plasma membrane	65.51	68.42
Bra000797.1-P	Field mustard	plasma membrane	65.2	68.09
Bra017552.1-P	Field mustard	plasma membrane	64.41	64.11
Bra029500.1-P	Field mustard	plasma membrane	64.41	62.54
Bra000798.1-P	Field mustard	extracellular, plasma membrane	25.67	59.27
Bra000799.1-P	Field mustard	plasma membrane	59.37	57.47
Bra029495.1-P	Field mustard	plasma membrane	55.43	54.24
Bra000800.1-P	Field mustard	plasma membrane	55.28	54.08
Bra017549.1-P	Field mustard	extracellular	7.24	51.11
Bra029496.1-P	Field mustard	plasma membrane	50.39	50.24
Bra000754.1-P	Field mustard	cytosol	19.68	34.92
Bra029425.1-P	Field mustard	cytosol	11.34	33.96

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.17	Gene3D:3.30.200.20	Gene3D:3.30.430.20	EnsemblPlantsGene:Bra029470	EnsemblPlants:Bra029470.1
EnsemblPlants:Bra029470.1-P	InterPro:GNK2	InterPro:GNK2_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002902	InterPro:IPR038408	InterPro:Kinase-like_dom_sf
UniProt:M4EL03	PFAM:PF00069	PFAM:PF01657	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS51473	PANTHER:PTHR27002	PANTHER:PTHR27002:SF348	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000254277C	SEG:seg

Description

AT4G04540 (E=6e-218) | protein kinase family protein

Coordinates

chrA09:+:17791104..17793772

Molecular Weight (calculated)

70552.4 Da

IEP (calculated)

6.948

GRAVY (calculated)

-0.155

Length

635 amino acids

Sequence
(BLAST)

001: MGLNPVLIIF LSSSLLIVLQ NLDVANAVTC SGSFINGNSS YFQNRDNLFS TLASKVVANG GFYNASLGKS PNSVHALVLC KRGYERQDCI SCVEKVTQEI
101: QTGCPNRMDS FKWDNDDGDH VNCLVRSSNH STFKNFQLVP AVIFPNALTI EPSKDMTLFR QQWEATVNRT IEDAAEAETS SILKYYSAVE AEFTEFPNVY
201: ILMQCTPDIT SRECKICLEK CATYFKKQFW GRQGGEVSRP SCVFRWDLYA FHGAFDNVTR VPAPPGPQAQ ANGTFITDKK GRSNRYSGTI AIIVVPSLIN
301: LLVFIGLIKF YARRKNSYNG CNVGTAEYSD SNGQPILRFD LGSILMATND FSSERKLGQG GFGTVHKGTL PNGQEIAVKR LTKGSGQGDL EFKNEVSLLT
401: RLQHRNLVKL LGFCNEGDEE ILIYEFVPNS SLDHFIFDEG KRSLLTWEVR FKIIEGIARG LLYLHEDSQL KIIHRDLKAS NILLDAEMNP KVADFGTARL
501: FEADETRAET RRIAGTRFGV VLLEMISGGK NNSFKGEGLA AYAWKRWVEG KPEIIIDPFL VENPSNEIIK LIQIGLLCVQ ENAGNRPTMN SVIVWLGSET
601: IIIPLPNAPA FTGSMSQSEK GTTSISNVFT ELSCR

Best Arabidopsis Sequence Match ( AT4G04540.1 )
(BLAST)

001: MGKYSVLMIF IASSLLIVLQ NVEIVNAVGC TGSFFNGNSS YAQNRRDLFS TLPNKVVTNG GFYNSSLGKS PNIVHAVALC GRGYEQQACI RCVDSAIQGI
101: LTTTSCLNRV DSFTWDKDEE DNVSCLVSTS NHSTFGNLEL RPSVRYQSPN SIEPSKNMTL FEQEWNAMAN RTVESATEAE TSSVLKYYSA EKAEFTEFPN
201: VYMLMQCTPD ITSQDCKTCL GECVTLFKEQ VWGRQGGEVY RPSCFFRWDL YAFHGAFDNV TRVPAPPRPQ AQGNESSITK KKGRSIGYGG IIAIVVVLTF
301: INILVFIGYI KVYGRRKESY NKINVGSAEY SDSDGQFMLR FDLGMVLAAT DEFSSENTLG QGGFGTVYKG TLLNGQEVAV KRLTKGSGQG DIEFKNEVSL
401: LTRLQHRNLV KLLGFCNEGD EQILVYEFVP NSSLDHFIFD DEKRSLLTWE MRYRIIEGIA RGLLYLHEDS QLKIIHRDLK ASNILLDAEM NPKVADFGTA
501: RLFDSDETRA ETKRIAGTRG YMAPEYLNHG QISAKSDVYS FGVMLLEMIS GERNNSFEGE GLAAFAWKRW VEGKPEIIID PFLIEKPRNE IIKLIQIGLL
601: CVQENPTKRP TMSSVIIWLG SETNIIPLPK APAFTGSRSQ SEIGAMSMSD DVFTELSCR

Arabidopsis Description

CRK39Putative cysteine-rich receptor-like protein kinase 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYS7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.