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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, plasma membrane

Predictor Summary:
  • extracellular 6
  • golgi 5
  • plasma membrane 7
  • endoplasmic reticulum 5
  • vacuole 5
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:nucleus
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra017549.1-P Field mustard extracellular 17.82 54.44
CDY65897 Canola plasma membrane 96.36 42.74
Bra017551.1-P Field mustard plasma membrane 66.91 30.46
Bra000796.1-P Field mustard plasma membrane 66.55 30.1
Bra000797.1-P Field mustard plasma membrane 65.09 29.44
Bra017552.1-P Field mustard plasma membrane 61.45 26.49
Bra029470.1-P Field mustard plasma membrane 59.27 25.67
Bra029499.1-P Field mustard plasma membrane 60.73 25.5
Bra018493.1-P Field mustard plasma membrane 58.91 24.85
Bra022095.1-P Field mustard plasma membrane 57.09 24.01
Bra018492.1-P Field mustard cytosol 41.09 21.65
Bra029500.1-P Field mustard plasma membrane 48.73 20.49
Bra018496.1-P Field mustard cytosol 38.18 19.13
Bra000799.1-P Field mustard plasma membrane 44.36 18.6
Bra029496.1-P Field mustard plasma membrane 40.0 17.27
Bra000800.1-P Field mustard plasma membrane 40.0 16.95
Bra029495.1-P Field mustard plasma membrane 37.82 16.02
Bra029425.1-P Field mustard cytosol 7.64 9.91
Bra000754.1-P Field mustard cytosol 7.64 5.87
Protein Annotations
EnsemblPlants:Bra000798.1EnsemblPlants:Bra000798.1-PEnsemblPlantsGene:Bra000798Gene3D:1.10.510.10Gene3D:3.30.430.20InterPro:GNK2
InterPro:GNK2_sfInterPro:IPR002902InterPro:IPR038408PANTHER:PTHR27002PANTHER:PTHR27002:SF348PFAM:PF01657
PFscan:PS51473SignalP:SignalP-noTMUniParc:UPI00025404ABUniProt:M4C9B9MapMan:35.1:
Description
AT4G04540 (E=2e-055) | protein kinase family protein
Coordinates
chrA03:+:13200775..13203156
Molecular Weight (calculated)
30875.5 Da
IEP (calculated)
4.841
GRAVY (calculated)
-0.209
Length
275 amino acids
Sequence
(BLAST)
001: MGKFPALMII LASYLLFHQT LEAVNGARCF GSLDSNSSYA QNRRDLFSTL ANDVVTNGGF YNASLGQYPN TVYALGFCEK YYEQKACLRC LESLALDTET
101: SCGNITKSFV WSSDDEDRFW CLIRSSNQPF GNLELIPPLI EADPDHIEPS KDMTLFMQQW ESAVNKTLET ATQANTSSVH KYYSAIHAHF TEFPNVNMAR
201: KRLAEGRPEV IIDPLLIENP SNEIIKLIHI GLLCAQQNAT QRPTMSTVIV WLGSHSQSED DTMSMSNVFT ELSCR
Best Arabidopsis Sequence Match ( AT4G04540.1 )
(BLAST)
001: MGKYSVLMIF IASSLLIVLQ NVEIVNAVGC TGSFFNGNSS YAQNRRDLFS TLPNKVVTNG GFYNSSLGKS PNIVHAVALC GRGYEQQACI RCVDSAIQGI
101: LTTTSCLNRV DSFTWDKDEE DNVSCLVSTS NHSTFGNLEL RPSVRYQSPN SIEPSKNMTL FEQEWNAMAN RTVESATEAE TSSVLKYYSA EKAEFTEFPN
201: VYMLMQCTPD ITSQDCKTCL GECVTLFKEQ VWGRQGGEVY RPSCFFRWDL YAFHGAFDNV TRVPAPPRPQ AQGNESSITK KKGRSIGYGG IIAIVVVLTF
301: INILVFIGYI KVYGRRKESY NKINVGSAEY SDSDGQFMLR FDLGMVLAAT DEFSSENTLG QGGFGTVYKG TLLNGQEVAV KRLTKGSGQG DIEFKNEVSL
401: LTRLQHRNLV KLLGFCNEGD EQILVYEFVP NSSLDHFIFD DEKRSLLTWE MRYRIIEGIA RGLLYLHEDS QLKIIHRDLK ASNILLDAEM NPKVADFGTA
501: RLFDSDETRA ETKRIAGTRG YMAPEYLNHG QISAKSDVYS FGVMLLEMIS GERNNSFEGE GLAAFAWKRW VEGKPEIIID PFLIEKPRNE IIKLIQIGLL
601: CVQENPTKRP TMSSVIIWLG SETNIIPLPK APAFTGSRSQ SEIGAMSMSD DVFTELSCR
Arabidopsis Description
CRK39Putative cysteine-rich receptor-like protein kinase 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYS7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.