CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
plasma membrane 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000798.1-P	Field mustard	extracellular, plasma membrane	42.74	96.36
CDY21305	Canola	cytosol	41.77	82.75
CDX90870	Canola	cytosol	65.0	75.19
CDX90866	Canola	plasma membrane	76.45	73.04
CDX90869	Canola	plasma membrane	76.13	72.39
CDX90868	Canola	plasma membrane	73.87	71.79
CDX90867	Canola	plasma membrane	73.23	71.27
CDX97323	Canola	cytosol	59.84	67.58
CDY33543	Canola	cytosol	59.68	67.4
CDX97326	Canola	plasma membrane	69.52	66.1
CDX97327	Canola	plasma membrane	69.52	66.0
CDY51854	Canola	plasma membrane	67.1	63.61
CDY16663	Canola	plasma membrane	66.77	63.21
CDY62376	Canola	plasma membrane	52.42	62.86
CDY37174	Canola	plasma membrane	65.97	62.54
CDY53873	Canola	plasma membrane	59.68	58.08
CDY16662	Canola	plasma membrane	60.32	57.1
CDY21304	Canola	plasma membrane	26.45	56.36
Bra017549.1-P	Field mustard	extracellular	8.06	55.56
CDY53875	Canola	plasma membrane	65.65	52.99
CDY21307	Canola	plasma membrane	55.48	52.44
CDX90871	Canola	plasma membrane	55.48	52.44
CDX90872	Canola	plasma membrane	53.39	50.84
CDY16698	Canola	extracellular, plasma membrane	23.55	50.69
CDY21309	Canola	plasma membrane	52.26	50.31
CDY16665	Canola	plasma membrane	51.77	49.46
CDY68796	Canola	plasma membrane	52.26	49.39
CDY53877	Canola	plasma membrane	50.32	48.98
CDY16664	Canola	plasma membrane	49.84	48.43
CDX94471	Canola	cytosol	20.48	35.88
CDY26975	Canola	cytosol, mitochondrion, plastid	9.84	34.86
CDY51546	Canola	plasma membrane	13.87	33.99
CDX94557	Canola	plasma membrane	40.32	31.57
CDX90809	Canola	mitochondrion	14.03	28.62

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.17	MapMan:18.4.1.24.1	Gene3D:3.30.200.20	Gene3D:3.30.430.20	GO:A0A078JKL1
UniProt:A0A078JKL1	EnsemblPlants:CDY65897	ProteinID:CDY65897	ProteinID:CDY65897.1	InterPro:GNK2	InterPro:GNK2_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00050971001
InterPro:IPR000719	InterPro:IPR002902	InterPro:IPR038408	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF01657
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51473	PANTHER:PTHR27002	PANTHER:PTHR27002:SF348
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0004EE9085	SEG:seg	:	:	:

Description

BnaCnng49020DBnaCnng49020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JKL1]

Coordinates

chrLK034992:-:18870..21224

Molecular Weight (calculated)

69744.4 Da

IEP (calculated)

5.724

GRAVY (calculated)

-0.198

Length

620 amino acids

Sequence
(BLAST)

001: MIILASSLLF HQTLEAVNGA RCFGSLDSNS SYAQNRRDLF STLANDVVTN GGFYNASLGQ YPNTVYALGF CEKYYEQKAC LRCLESLALD TETSCGNITK
101: SFVWSSDDED RFWCLIRSSN QPFGNLELIP PLIEADPDHI EPSKDMTLFM QQWESAVNKT LETATQANTS SVHKYYSAIH AHFTEFPNVN MAMQCTPDIT
201: SQDCKQCLGD CVEYFREQFR GRAGGMASFP SCLFRWDNVT SMPALPRPPA QEKRPSSIPE KKALQNYFGI ITIIVVLTFI TLLVFIGFYK VRARRRKLNK
301: GINLGCAEYS NSDGQFMLLF NLDMISMATA DFSPENKLGQ GGFGTVYKGI LLNGIEIAVK RLTRGSEGGI EFRNEVSILT RVQHKNLVKL LGFCNEGDEK
401: ILVYEFVPNS SLDRFIFDEE KRSLLTWEVR FKIIEGIARG LVYLHEDSQL KIIHRDLKAG NILLDAEMNP KVADFGTARL FDTDETRDET KRIAGTRGYM
501: APEYLNYGQI SAKSDVYSFG VVLLEMISGQ RNNSFEGEGI AAFARKRWAE GRPEVIIDPL LIENPSNEII KLIHIGLLCA QQNATKRPTM STVIVWLGSH
601: SQSEDDTMSM SNVFTELSCR

Best Arabidopsis Sequence Match ( AT4G04540.1 )
(BLAST)

001: MGKYSVLMIF IASSLLIVLQ NVEIVNAVGC TGSFFNGNSS YAQNRRDLFS TLPNKVVTNG GFYNSSLGKS PNIVHAVALC GRGYEQQACI RCVDSAIQGI
101: LTTTSCLNRV DSFTWDKDEE DNVSCLVSTS NHSTFGNLEL RPSVRYQSPN SIEPSKNMTL FEQEWNAMAN RTVESATEAE TSSVLKYYSA EKAEFTEFPN
201: VYMLMQCTPD ITSQDCKTCL GECVTLFKEQ VWGRQGGEVY RPSCFFRWDL YAFHGAFDNV TRVPAPPRPQ AQGNESSITK KKGRSIGYGG IIAIVVVLTF
301: INILVFIGYI KVYGRRKESY NKINVGSAEY SDSDGQFMLR FDLGMVLAAT DEFSSENTLG QGGFGTVYKG TLLNGQEVAV KRLTKGSGQG DIEFKNEVSL
401: LTRLQHRNLV KLLGFCNEGD EQILVYEFVP NSSLDHFIFD DEKRSLLTWE MRYRIIEGIA RGLLYLHEDS QLKIIHRDLK ASNILLDAEM NPKVADFGTA
501: RLFDSDETRA ETKRIAGTRG YMAPEYLNHG QISAKSDVYS FGVMLLEMIS GERNNSFEGE GLAAFAWKRW VEGKPEIIID PFLIEKPRNE IIKLIQIGLL
601: CVQENPTKRP TMSSVIIWLG SETNIIPLPK APAFTGSRSQ SEIGAMSMSD DVFTELSCR

Arabidopsis Description

CRK39Putative cysteine-rich receptor-like protein kinase 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYS7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.