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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY16662 Canola plasma membrane 97.02 94.35
CDY21305 Canola cytosol 40.03 81.47
CDY33543 Canola cytosol 58.71 68.12
CDX97323 Canola cytosol 58.4 67.76
CDX90870 Canola cytosol 54.16 64.37
CDY51854 Canola plasma membrane 65.62 63.91
CDY37174 Canola plasma membrane 64.99 63.3
CDY16663 Canola plasma membrane 64.05 62.29
CDX97326 Canola plasma membrane 63.74 62.27
CDX97327 Canola plasma membrane 63.11 61.56
CDX90866 Canola plasma membrane 62.48 61.33
CDX90867 Canola plasma membrane 60.44 60.44
CDY62376 Canola plasma membrane 48.67 59.96
CDY65897 Canola plasma membrane 58.08 59.68
CDX90869 Canola plasma membrane 61.07 59.66
CDY21307 Canola plasma membrane 58.87 57.16
CDX90871 Canola plasma membrane 58.71 57.01
CDX90868 Canola plasma membrane 56.67 56.58
CDY68796 Canola plasma membrane 57.46 55.79
CDY16665 Canola plasma membrane 56.83 55.78
CDX90872 Canola plasma membrane 54.0 52.84
CDY21309 Canola plasma membrane 53.22 52.64
CDY53875 Canola plasma membrane 63.27 52.47
CDY16664 Canola plasma membrane 52.28 52.19
CDY53877 Canola plasma membrane 51.96 51.96
CDY16698 Canola extracellular, plasma membrane 20.88 46.18
CDX94557 Canola plasma membrane 56.2 45.2
CDY26975 Canola cytosol, mitochondrion, plastid 12.24 44.57
CDX94471 Canola cytosol 21.35 38.42
CDY21304 Canola plasma membrane 16.8 36.77
CDY51546 Canola plasma membrane 14.29 35.97
CDX90809 Canola mitochondrion 13.97 29.28
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.17MapMan:18.4.1.24.1Gene3D:3.30.200.20Gene3D:3.30.430.20GO:A0A078IXY6
UniProt:A0A078IXY6EnsemblPlants:CDY53873ProteinID:CDY53873ProteinID:CDY53873.1InterPro:GNK2InterPro:GNK2_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301
GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00011627001InterPro:IPR000719InterPro:IPR002902InterPro:IPR038408
InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF01657ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PFscan:PS51473PANTHER:PTHR27002PANTHER:PTHR27002:SF181InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMUniParc:UPI0004EEDDC4SEG:seg:
Description
BnaCnng25670DBnaCnng25670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXY6]
Coordinates
chrLK033246:-:2594..5860
Molecular Weight (calculated)
71495.5 Da
IEP (calculated)
5.811
GRAVY (calculated)
-0.228
Length
637 amino acids
Sequence
(BLAST)
001: MRKLCDVILF SCFLLLTFVD VEADCEGSLF AVNSTYSENL NSLFSSLASN VTTNDGFYNT STGEGSNKVY GLALCGRGYK KQACVNCVEQ AIQESQQRCP
101: NRMKSFRWTT RDNDNASCLV RYANHSVSAK LELFPPTLSD NPLNIEEPKS LKLFRREWEA LTNLTMQSAT SAPENSSVVL KFYSVVRAEF TEFANVYMMM
201: QCTPDILSNE CNKCLSQCVL NFQNNNWGSQ GGAGRLPSCY FRWDLYPICG SSENMTRVSM ISRATTLPQG DTVSQPEYDK KGKRIRNGTI AIIVVPTVIN
301: LFVFVECFDS DGQSMLRFDL GMILSATNEF SPENKLGQGG FGTVYRGILP NGQEIAVKRL VSGSGQGDTE FKNEVSLLTR LQHKNLVKLL GFCHEGDEEI
401: LVYELVPNSS LDHFIFADKE KRSLLTWEVR FKIIEGVARG LLYLHEDSQL KIIHRDLKAS NILLDAEMNP KVADFGTARL FEADETRAET RRIAGTRGYM
501: APEYLNHGQI STKSDVFSFG VMLLEMISGE RNNSFEGEGL AAFTWKRWVE GKPETVIDPL LMKNPRNEII KLIQIGLLCV QENAAKRPTM SSVIVWFGSE
601: TIIIPLPRAP AFTRDQSQSE NSKMSMNNDI FTELSCR
Best Arabidopsis Sequence Match ( AT4G04510.2 )
(BLAST)
001: MIMKNSAAIF LTSSLILLLQ TLHGVKAGFI CVGSSFPTNS SYQKNRDSLF STLSDKVTTN GGFYNASLDG VHVVGLCRRD YDRQGCINCV EESIRQIKTS
101: CSNRVQSFHC NSDDRERVSC LVRTTDQSTY RILELGPATN DPSPVAIDTF AKNMTLFRQE WEAMVDRTLE AVTIDNSTTV LKYYGALKSE FSEFPNVYMM
201: MQCTPDINSG ACKRCLQASV TYFRDQNWGR QGGGICRPSC VFRWEFYPFY GAFANVTRVP APPRALIPRT EAISITRLKG GIIAIFVVPI VINLLVFIGL
301: IRAYTRIRKS YNGINEAQYD YGGQSKLRFD FRMILTATDD FSFENKIGQG GFGSVYKGKL PGGEEIAVKR LTRGSGQGEI EFRNEVLLLT RLQHRNLVKL
401: LGFCNEGDEE ILVYEFVPNS SLDHFIFDEE KRLLLTWDMR ARIIEGVARG LVYLHEDSQL RIIHRDLKAS NILLDAYMNP KVADFGMARL FNMDQTRAVT
501: RKVVGTFGYM APEYVRNRTF SVKTDVYSFG VVLLEMITGR SNKNYFEALG LPAYAWKCWV AGEAASIIDH VLSRSRSNEI MRFIHIGLLC VQENVSKRPT
601: MSLVIQWLGS ETIAIPLPTV AGFTNASYQA EHEAGTLSLN ELSITELSPR
Arabidopsis Description
CRK38cysteine-rich RLK (RECEPTOR-like protein kinase) 38 [Source:TAIR;Acc:AT4G04510]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.