CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 5
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51546	Canola	plasma membrane	67.43	81.03
Bra000754.1-P	Field mustard	cytosol	70.07	59.5
AT4G11890.3	Thale cress	cytosol	54.28	46.61
CDX94471	Canola	cytosol	45.39	38.98
CDY21305	Canola	cytosol	28.62	27.8
CDY33543	Canola	cytosol	29.93	16.58
CDX97323	Canola	cytosol	29.93	16.58
CDX90870	Canola	cytosol	26.32	14.93
CDY65897	Canola	plasma membrane	28.62	14.03
CDY53873	Canola	plasma membrane	29.28	13.97
CDY37174	Canola	plasma membrane	29.93	13.91
CDX97326	Canola	plasma membrane	29.61	13.8
CDX97327	Canola	plasma membrane	29.61	13.78
CDY51854	Canola	plasma membrane	29.61	13.76
CDY16663	Canola	plasma membrane	29.28	13.59
CDY68796	Canola	plasma membrane	29.28	13.57
CDY16665	Canola	plasma membrane	28.95	13.56
CDY53877	Canola	plasma membrane	28.29	13.5
CDY16664	Canola	plasma membrane	28.29	13.48
CDY16662	Canola	plasma membrane	28.95	13.44
CDY21307	Canola	plasma membrane	28.95	13.41
CDX90871	Canola	plasma membrane	28.95	13.41
CDX90866	Canola	plasma membrane	28.29	13.25
CDX90869	Canola	plasma membrane	27.96	13.04
CDX90867	Canola	plasma membrane	26.97	12.87
CDY21309	Canola	plasma membrane	26.64	12.58
CDX90868	Canola	plasma membrane	26.32	12.54
CDX90872	Canola	plasma membrane	26.64	12.44
CDY53875	Canola	plasma membrane	27.96	11.07
CDY62376	Canola	plasma membrane	15.13	8.9
CDY26975	Canola	cytosol, mitochondrion, plastid	4.93	8.57
CDX94557	Canola	plasma membrane	18.09	6.94
CDY21304	Canola	plasma membrane	0.33	0.34
CDY16698	Canola	extracellular, plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	GO:A0A078DQR1	EnsemblPlants:CDX90809	ProteinID:CDX90809	ProteinID:CDX90809.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00151516001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069
PFscan:PS50011	PANTHER:PTHR27002	PANTHER:PTHR27002:SF363	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	UniParc:UPI0004EE5B63
SEG:seg	:	:	:	:	:

Description

BnaA03g24890D

Coordinates

chrLK031864:+:656599..658444

Molecular Weight (calculated)

34383.1 Da

IEP (calculated)

5.871

GRAVY (calculated)

-0.267

Length

304 amino acids

Sequence
(BLAST)

001: MWRPKDKTRL FCSTRSNHPF SQPTHSWPLF FTLLSPNLSL NSAAEAAPTR PPDLFQLPSP PFPSETNSLT LLSPTSIPLR EGEMCRNIVQ GIARGLRYIH
101: EESQLWVVHR DINPTNILLD LEFKPKIAGF ALARMMQQGE SEGESTVIAG TIGFLDPEYM RTGRVSIKSD VYAFGVTILM IISRRRAYSS GGEESLIEHV
201: MRCWNRGETI YVVHEVMREQ QREDSISFEG EILRYIHIAL LCIDENAETR PTIDKVLHWF SCSSTPLPEP TISDRFLVEA ETNLCFSPSL SPGYSSDMSP
301: TSSR

Best Arabidopsis Sequence Match ( AT4G11890.3 )
(BLAST)

001: MAVTSLLDTV FRRRKKKSTE FISYTAVFEF DLDTIKAATN DFSELVGRGG FGFVYKGRLQ NGQEIAVKIL STSSIRTERQ FHNELIILSK LKHKNLINLL
101: GFCTKRDQHG LVYEFMPNSS LDCFILDPHR AAQLNWEMCR NIIDGIARGL RYLHEESGLW VVHRDIKPGN ILLDSDLKPK IVGFELARTM QQGENAAETT
201: EIVGTVGYLD PEYIRSGRVS VKSDVYAFGV TILTIISRRK AWSVDGDSLI KYVRRCWNRG EAIDVIHEVM REEEREYSIS EILRYIHIAL LCVDENAERR
301: PNIDKVLHWF SCFSTPLPDP TFGNRFLVEE ETNWPWSPSL SPGHSSVTSP ISSR

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JPT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.