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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY21305 Canola cytosol 54.29 92.97
CDX97323 Canola cytosol 70.9 69.22
CDY33543 Canola cytosol 70.71 69.03
CDX90869 Canola plasma membrane 83.77 68.86
CDX90866 Canola plasma membrane 81.16 67.03
Bra017551.1-P Field mustard plasma membrane 75.19 66.72
CDX90867 Canola plasma membrane 79.1 66.56
CDY65897 Canola plasma membrane 75.19 65.0
CDX90868 Canola plasma membrane 74.81 62.85
CDY21304 Canola plasma membrane 33.21 61.17
CDX97327 Canola plasma membrane 72.57 59.57
CDX97326 Canola plasma membrane 72.39 59.51
CDY51854 Canola plasma membrane 70.52 57.8
CDY16663 Canola plasma membrane 70.15 57.4
CDY37174 Canola plasma membrane 69.96 57.34
CDY62376 Canola plasma membrane 53.73 55.71
CDY53873 Canola plasma membrane 64.37 54.16
CDY16662 Canola plasma membrane 65.49 53.59
CDY53875 Canola plasma membrane 69.59 48.57
CDY21307 Canola plasma membrane 58.58 47.87
CDY16665 Canola plasma membrane 57.09 47.15
CDY68796 Canola plasma membrane 57.46 46.95
CDX90871 Canola plasma membrane 57.46 46.95
CDX90872 Canola plasma membrane 56.53 46.54
CDY21309 Canola plasma membrane 55.41 46.12
CDY53877 Canola plasma membrane 54.29 45.68
CDY16664 Canola plasma membrane 53.92 45.3
CDY26975 Canola cytosol, mitochondrion, plastid 13.25 40.57
CDY16698 Canola extracellular, plasma membrane 20.9 38.89
CDX94471 Canola cytosol 23.13 35.03
CDY51546 Canola plasma membrane 14.37 30.43
CDX94557 Canola plasma membrane 39.93 27.02
CDX90809 Canola mitochondrion 14.93 26.32
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.17MapMan:18.4.1.24.1Gene3D:3.30.200.20Gene3D:3.30.430.20GO:A0A078DNS3
EnsemblPlants:CDX90870ProteinID:CDX90870ProteinID:CDX90870.1InterPro:GNK2InterPro:GNK2_sfGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00151592001InterPro:IPR000719InterPro:IPR002902InterPro:IPR038408InterPro:Kinase-like_dom_sf
PFAM:PF00069PFAM:PF01657ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS51473
PANTHER:PTHR27002PANTHER:PTHR27002:SF348InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI0004EF25A9SEG:seg::
Description
BnaA03g25500D
Coordinates
chrLK031864:+:997699..1000529
Molecular Weight (calculated)
60392.3 Da
IEP (calculated)
6.206
GRAVY (calculated)
-0.170
Length
536 amino acids
Sequence
(BLAST)
001: MDSFVWGSDD EDRVSCLVRS SNHSFGNLEL SPPVTGISPD QIEPSINMTL FMQQWEYTVN NTLVAATKAN TSSVHKYYSA VKAEFTAFPN VYMLTQCTPD
101: ITSQDCKQCL EACLKYFREQ FRGRTGGMVS LPSCFFRWDL FSFHGVFDNV TRFSALPRPQ LQEKGSSIPN KKGRSMHWGI ITIIVVFTFF NLVVFIGFYK
201: VKSWTRKLNN GTNVGCAEYS DSDGQLMLRF NLDMILLATA DFSPENKLGQ GGFGTVYKGT LLNGKEIAVK RLARGSEGGI EFRNEVLLLT RLQHKNLVKL
301: LGFCNEGDEE ILVYEFVSHS SLDRFIFDEE KRSLLTWEVR FKIIEGIARG LVYLHEDSQL KIIHRDLKTS NILLDAEMNP KVADFGTARL FETDETQAET
401: KRKLTGYMAP EYLNHGQISA KSDVFSFGVV LLEMISGQRN NSFEGEGIAL FAWKRWAEGR PEVIIDPLLV KNSSVEIIKL IQTGLLFVQE NATNRPTMSS
501: VMVWLGSETI TIPLPKAPAF TESHSQSEDG AMSSQN
Best Arabidopsis Sequence Match ( AT4G04540.1 )
(BLAST)
001: MGKYSVLMIF IASSLLIVLQ NVEIVNAVGC TGSFFNGNSS YAQNRRDLFS TLPNKVVTNG GFYNSSLGKS PNIVHAVALC GRGYEQQACI RCVDSAIQGI
101: LTTTSCLNRV DSFTWDKDEE DNVSCLVSTS NHSTFGNLEL RPSVRYQSPN SIEPSKNMTL FEQEWNAMAN RTVESATEAE TSSVLKYYSA EKAEFTEFPN
201: VYMLMQCTPD ITSQDCKTCL GECVTLFKEQ VWGRQGGEVY RPSCFFRWDL YAFHGAFDNV TRVPAPPRPQ AQGNESSITK KKGRSIGYGG IIAIVVVLTF
301: INILVFIGYI KVYGRRKESY NKINVGSAEY SDSDGQFMLR FDLGMVLAAT DEFSSENTLG QGGFGTVYKG TLLNGQEVAV KRLTKGSGQG DIEFKNEVSL
401: LTRLQHRNLV KLLGFCNEGD EQILVYEFVP NSSLDHFIFD DEKRSLLTWE MRYRIIEGIA RGLLYLHEDS QLKIIHRDLK ASNILLDAEM NPKVADFGTA
501: RLFDSDETRA ETKRIAGTRG YMAPEYLNHG QISAKSDVYS FGVMLLEMIS GERNNSFEGE GLAAFAWKRW VEGKPEIIID PFLIEKPRNE IIKLIQIGLL
601: CVQENPTKRP TMSSVIIWLG SETNIIPLPK APAFTGSRSQ SEIGAMSMSD DVFTELSCR
Arabidopsis Description
CRK39Putative cysteine-rich receptor-like protein kinase 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYS7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.