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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 3
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90871 Canola plasma membrane 94.97 94.97
Bra000799.1-P Field mustard plasma membrane 89.18 89.18
AT4G04510.2 Thale cress plasma membrane 71.65 72.31
CDY21305 Canola cytosol 31.55 66.13
CDX97323 Canola cytosol 52.74 63.02
CDY33543 Canola cytosol 52.59 62.84
CDY62376 Canola plasma membrane 48.48 61.51
CDY16663 Canola plasma membrane 59.15 59.24
CDY51854 Canola plasma membrane 58.84 59.02
CDY53873 Canola plasma membrane 57.16 58.87
CDX90870 Canola cytosol 47.87 58.58
CDY37174 Canola plasma membrane 58.38 58.56
CDY16665 Canola plasma membrane 57.62 58.24
CDY16662 Canola plasma membrane 57.77 57.86
CDX90866 Canola plasma membrane 57.16 57.78
CDY68796 Canola plasma membrane 57.62 57.62
CDX97326 Canola plasma membrane 57.16 57.52
CDX97327 Canola plasma membrane 56.55 56.81
CDX90869 Canola plasma membrane 55.79 56.13
CDX90872 Canola plasma membrane 55.64 56.07
CDY21309 Canola plasma membrane 55.03 56.06
CDX90867 Canola plasma membrane 54.42 56.04
CDY65897 Canola plasma membrane 52.44 55.48
CDY53877 Canola plasma membrane 52.74 54.32
CDX90868 Canola plasma membrane 52.74 54.23
CDY16698 Canola extracellular, plasma membrane 23.78 54.17
CDY16664 Canola plasma membrane 52.29 53.76
CDY53875 Canola plasma membrane 58.38 49.87
CDY26975 Canola cytosol, mitochondrion, plastid 11.28 42.29
CDX94471 Canola cytosol 21.65 40.11
CDY21304 Canola plasma membrane 16.77 37.8
CDY51546 Canola plasma membrane 12.96 33.6
CDX94557 Canola plasma membrane 40.09 33.21
CDX90809 Canola mitochondrion 13.41 28.95
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.17MapMan:18.4.1.24.1Gene3D:3.30.200.20Gene3D:3.30.430.20GO:A0A078G8F9
UniProt:A0A078G8F9EnsemblPlants:CDY21307ProteinID:CDY21307ProteinID:CDY21307.1InterPro:GNK2InterPro:GNK2_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00015646001
InterPro:IPR000719InterPro:IPR002902InterPro:IPR038408InterPro:Kinase-like_dom_sfPFAM:PF01657PFAM:PF07714
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS51473PANTHER:PTHR27002PANTHER:PTHR27002:SF348
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EEEB14SEG:seg::
Description
BnaC03g29910DBnaC03g29910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G8F9]
Coordinates
chrLK032119:+:452050..454785
Molecular Weight (calculated)
72807.9 Da
IEP (calculated)
7.766
GRAVY (calculated)
-0.003
Length
656 amino acids
Sequence
(BLAST)
001: MKKIATIFLF ISLLFETLNG VKAGFLCING TLLANSSYGQ NRNSVFSSLA SQVITNRGFY NASLNSVHAV ALCRRGYERQ ACINCVEKAI QLIKNICSNG
101: VESFNWNGDD ADHVSCLVRT TNHSTFQKLD LGPATLDESP LNIGSSAKNM TLFRQEWEAT VNRTLEAATV NTSASVLKYY GVANAEFVEF PNVYMMMQCT
201: PDITSGECKS CLEECVTYFR DVSWGKQGGT VGRPSCLFRW DLYPFYGAFA NITRVPAPPG PLIPQAHAIS VTSLKGKIIA IVVVPTVINL FVLLGLIRAY
301: RQIKKSKEET SVWTGEDCIS DSQFMLRFDL SMVLLATGDF SPETKIGQGG FGSVYKGILP SGQEIAVKRL TRGSGQGEIE FRNEVSLLTR LQHRNLVKLL
401: GFCSEGEEDI LIYEHVPNSS LDHFIFNEEK RVLLTWNVRY KIIEGVARGL LYLHEDSQLR IIHRDLKASN VLLDAEMNPK VSDFGMARLF NMDQTRGVTR
501: RRVGTFGYMA PEYIKNGRLS AKTDVYSFGV VLLEMITGQS NNNYFEAMGL PAYAWKCWVA GEAASIIDPV LSRTPTNEIL RFIHIGLLCV QENVAKRPTM
601: SLVIQWLGSD TIVIPLPTTA AFTTTELHKI DAMDQAKGEA GTLSLNKLSI TELSPR
Best Arabidopsis Sequence Match ( AT4G04510.1 )
(BLAST)
001: MKNSAAIFLT SSLILLLQTL HGVKAGFICV GSSFPTNSSY QKNRDSLFST LSDKVTTNGG FYNASLDGVH VVGLCRRDYD RQGCINCVEE SIRQIKTSCS
101: NRVQSFHCNS DDRERVSCLV RTTDQSTYRI LELGPATNDP SPVAIDTFAK NMTLFRQEWE AMVDRTLEAV TIDNSTTVLK YYGALKSEFS EFPNVYMMMQ
201: CTPDINSGAC KRCLQASVTY FRDQNWGRQG GGICRPSCVF RWEFYPFYGA FANVTRVPAP PRALIPRTEA ISITRLKGGI IAIFVVPIVI NLLVFIGLIR
301: AYTRIRKSYN GINEAQYDYG GQSKLRFDFR MILTATDDFS FENKIGQGGF GSVYKGKLPG GEEIAVKRLT RGSGQGEIEF RNEVLLLTRL QHRNLVKLLG
401: FCNEGDEEIL VYEFVPNSSL DHFIFDEEKR LLLTWDMRAR IIEGVARGLV YLHEDSQLRI IHRDLKASNI LLDAYMNPKV ADFGMARLFN MDQTRAVTRK
501: VVGTFGYMAP EYVRNRTFSV KTDVYSFGVV LLEMITGRSN KNYFEALGLP AYAWKCWVAG EAASIIDHVL SRSRSNEIMR FIHIGLLCVQ ENVSKRPTMS
601: LVIQWLGSET IAIPLPTVAG FTNASYQAEH EAGTLSLNEL SITELSPR
Arabidopsis Description
CRK38cysteine-rich RLK (RECEPTOR-like protein kinase) 38 [Source:TAIR;Acc:AT4G04510]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.