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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra029499.1-P Field mustard plasma membrane 98.32 98.32
CDY53875 Canola plasma membrane 96.64 82.42
CDY21305 Canola cytosol 38.32 80.19
CDY62376 Canola plasma membrane 62.9 79.69
CDX97326 Canola plasma membrane 74.81 75.15
CDY16698 Canola extracellular, plasma membrane 32.98 75.0
CDX97323 Canola cytosol 62.44 74.5
CDY33543 Canola cytosol 62.29 74.32
CDX97327 Canola plasma membrane 72.21 72.43
CDY51854 Canola plasma membrane 71.91 72.02
CDY37174 Canola plasma membrane 71.14 71.25
CDX90870 Canola cytosol 57.4 70.15
CDX90866 Canola plasma membrane 69.31 69.95
CDX90869 Canola plasma membrane 67.33 67.64
CDX90867 Canola plasma membrane 65.19 67.03
CDY65897 Canola plasma membrane 63.21 66.77
CDX90868 Canola plasma membrane 63.82 65.52
CDY53873 Canola plasma membrane 62.29 64.05
CDY16662 Canola plasma membrane 63.36 63.36
CDY21307 Canola plasma membrane 59.24 59.15
CDX90871 Canola plasma membrane 58.47 58.38
CDY16665 Canola plasma membrane 56.64 57.16
CDY68796 Canola plasma membrane 56.95 56.86
CDX90872 Canola plasma membrane 54.96 55.3
CDY53877 Canola plasma membrane 53.59 55.1
CDY16664 Canola plasma membrane 53.59 55.02
CDY21309 Canola plasma membrane 53.44 54.35
CDY21304 Canola plasma membrane 22.44 50.52
CDY26975 Canola cytosol, mitochondrion, plastid 11.14 41.71
CDX94471 Canola cytosol 20.31 37.57
CDY51546 Canola plasma membrane 13.74 35.57
CDX94557 Canola plasma membrane 40.76 33.71
CDX90809 Canola mitochondrion 13.59 29.28
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.17MapMan:18.4.1.24.1Gene3D:3.30.200.20Gene3D:3.30.430.20GO:A0A078FW57
UniProt:A0A078FW57EnsemblPlants:CDY16663ProteinID:CDY16663ProteinID:CDY16663.1InterPro:GNK2InterPro:GNK2_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00094504001
InterPro:IPR000719InterPro:IPR002902InterPro:IPR038408InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF01657
ScanProsite:PS00108PFscan:PS50011PFscan:PS51473PANTHER:PTHR27002PANTHER:PTHR27002:SF348InterPro:Prot_kinase_dom
SMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EDDFE0
SEG:seg:::::
Description
BnaA09g20410DBnaA09g20410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FW57]
Coordinates
chrLK032066:-:371787..374556
Molecular Weight (calculated)
73171.7 Da
IEP (calculated)
6.826
GRAVY (calculated)
-0.162
Length
655 amino acids
Sequence
(BLAST)
001: MVKYFSLIIV LASSLLLVLQ DLEQVHALGC SGSFLNGNSS YFQNRHSLFS TLASKVVANG GFYNASLGKN PNRVYALVLC ARGYEQQACI SCVEKVTQEI
101: QTSCPNRMNS FHWDNDDGDH VSCLVRTSNQ STFKNFQLVP AVIYPSPLTM EPSKDMTLFS KQWEATVNRT VQAATEAKNI SVLQYYGAVE AEFTEFPNVY
201: MLMQCTPDIT SQDCKICLEK SGTYFKKQFW GRQGGEVSRP SCVFRWDLYA FHGAFDNITR VPVLPGGQGQ AQPPSKESSI KGNKGRSIGN GGIISIVVPA
301: LINILVFIGL IKLYTRRRQF NNIINEYSDG QLMLRFDLGM ILMATNDFSS DNTLGQGGFG LENRFQGILP NGQEIAVKRL TKGSGQGDME FKNEVSLLTR
401: LQHRNLVKLL GFCNEGDEEV LVYEFVPNSS LDHFIFDEEK RSFLTWEVRC KIIEGIARGL LYLHEDSQLK IIHRDLKASN ILLDAEMNPK VADFGTARLF
501: NTDETRAETR RLAGTRGYMA PEYVNHGQIS AKSDVYSFGV MLLEIISGER NKSFEGEGIA AFAWKRWVEG RPEIIIDTFL VENPSNEIIK LIQIGLLCVQ
601: ENASKRPTMS SVIVWLGSET IKVPLPKAPA FTSKQSQSED GIMSISNVCT ELSSR
Best Arabidopsis Sequence Match ( AT4G04540.1 )
(BLAST)
001: MGKYSVLMIF IASSLLIVLQ NVEIVNAVGC TGSFFNGNSS YAQNRRDLFS TLPNKVVTNG GFYNSSLGKS PNIVHAVALC GRGYEQQACI RCVDSAIQGI
101: LTTTSCLNRV DSFTWDKDEE DNVSCLVSTS NHSTFGNLEL RPSVRYQSPN SIEPSKNMTL FEQEWNAMAN RTVESATEAE TSSVLKYYSA EKAEFTEFPN
201: VYMLMQCTPD ITSQDCKTCL GECVTLFKEQ VWGRQGGEVY RPSCFFRWDL YAFHGAFDNV TRVPAPPRPQ AQGNESSITK KKGRSIGYGG IIAIVVVLTF
301: INILVFIGYI KVYGRRKESY NKINVGSAEY SDSDGQFMLR FDLGMVLAAT DEFSSENTLG QGGFGTVYKG TLLNGQEVAV KRLTKGSGQG DIEFKNEVSL
401: LTRLQHRNLV KLLGFCNEGD EQILVYEFVP NSSLDHFIFD DEKRSLLTWE MRYRIIEGIA RGLLYLHEDS QLKIIHRDLK ASNILLDAEM NPKVADFGTA
501: RLFDSDETRA ETKRIAGTRG YMAPEYLNHG QISAKSDVYS FGVMLLEMIS GERNNSFEGE GLAAFAWKRW VEGKPEIIID PFLIEKPRNE IIKLIQIGLL
601: CVQENPTKRP TMSSVIIWLG SETNIIPLPK APAFTGSRSQ SEIGAMSMSD DVFTELSCR
Arabidopsis Description
CRK39Putative cysteine-rich receptor-like protein kinase 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYS7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.