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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90869 Canola plasma membrane 88.54 86.5
Bra000797.1-P Field mustard plasma membrane 81.48 85.36
CDY21305 Canola cytosol 40.19 81.79
CDX90870 Canola cytosol 66.56 79.1
CDX90866 Canola plasma membrane 75.98 74.58
CDX90868 Canola plasma membrane 73.63 73.51
CDY65897 Canola plasma membrane 71.27 73.23
CDY33543 Canola cytosol 59.18 68.67
CDX97323 Canola cytosol 59.18 68.67
CDY62376 Canola plasma membrane 55.57 68.47
CDY21304 Canola plasma membrane 31.08 68.04
CDX97326 Canola plasma membrane 68.76 67.18
CDY51854 Canola plasma membrane 67.66 65.9
CDX97327 Canola plasma membrane 67.35 65.7
CDY16663 Canola plasma membrane 67.03 65.19
CDY37174 Canola plasma membrane 66.56 64.83
CDY53873 Canola plasma membrane 60.44 60.44
CDY16662 Canola plasma membrane 61.54 59.85
CDY16698 Canola extracellular, plasma membrane 26.84 59.38
CDY53875 Canola plasma membrane 66.25 54.95
CDY21307 Canola plasma membrane 56.04 54.42
CDX90871 Canola plasma membrane 55.57 53.96
CDX90872 Canola plasma membrane 54.95 53.76
CDY16665 Canola plasma membrane 54.0 53.0
CDY21309 Canola plasma membrane 53.53 52.95
CDY68796 Canola plasma membrane 54.32 52.74
CDY16664 Canola plasma membrane 50.55 50.47
CDY53877 Canola plasma membrane 50.08 50.08
CDY26975 Canola cytosol, mitochondrion, plastid 11.15 40.57
CDX94471 Canola cytosol 19.62 35.31
CDX94557 Canola plasma membrane 40.35 32.45
CDY51546 Canola plasma membrane 12.56 31.62
CDX90809 Canola mitochondrion 12.87 26.97
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.17MapMan:18.4.1.24.1Gene3D:3.30.200.20Gene3D:3.30.430.20GO:A0A078DPG4
EnsemblPlants:CDX90867ProteinID:CDX90867ProteinID:CDX90867.1InterPro:GNK2InterPro:GNK2_sfGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00151585001InterPro:IPR000719InterPro:IPR002902InterPro:IPR038408InterPro:Kinase-like_dom_sf
PFAM:PF00069PFAM:PF01657ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS51473
PANTHER:PTHR27002PANTHER:PTHR27002:SF348InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EDDD09SEG:seg:
Description
BnaA03g25470D
Coordinates
chrLK031864:+:945120..948929
Molecular Weight (calculated)
71496.4 Da
IEP (calculated)
8.184
GRAVY (calculated)
-0.105
Length
637 amino acids
Sequence
(BLAST)
001: MGKFSALMII LASSLLFVLQ TLEVVNGAKC YGSLAGNNSY AQNRKNLFST LTNKVLANGG FYNASLGQYP NRVYALGLCA RGFKPKVCLS CLERLSLETQ
101: RDCPNIMDSF VWGGDDEELV SCLVRSSNHS FGNLEISPPN IRMSPYHIRP LINMTLFMLE WEYTVNRTLE AATKAHASSA HKYYSASYAE FTAFPNVYML
201: MQCTPDITSQ GCKQCLEACL KYFREQFLGR IGGIATFPSC YFRWDLYPFH GAFLNVTRVP ALPRPPPQEK GSSIPDKKGK TNDMNRGIIT IIVVLTFIHL
301: LVFIGFYKVI ARRLKINNGK NVGGAEYTDS DGQFMLRYDL GMILSATAVF SPENKLGQGG FGTVYKGKLL NGKEIAVKRL TRGSEGDIEF KNEVSLLTRL
401: QHKNLVKLLG FCNEGDEEIL VYEFVPHSSL DRFIFDEEKR SLLTWDVRFK IIEGIARGLV YLHEDSQLKI IHRDLKASNI LLDAEMNPKV ADFGTARLFD
501: ADETRAETQQ IAGTRGYMAP EYLNHGQISA KCDVYSFGVV LLEMITGQRN NSFEEGIAAF VWKRWSEGRP VVIIDPLLVE NPNVQIIKYI QTGLLCVQED
601: ASKRPTMSSV MVWLGSETIT IPSPKAPDYT KSFSDRL
Best Arabidopsis Sequence Match ( AT4G04570.2 )
(BLAST)
001: MGKCSALMIF LSSSLLLVLQ TLHVVNAVKC FGNSFNGNSS TFAQNRQKLF PTLADKVIIN DGFYNASLGQ DPDKVYALVS CARGYDQDAC YNCVQSLTQN
101: TLTDCRSRRD SFIWGGNDDV TCLVRSSNQS TFGSVQLKPP VVWPSPDTIE SSKNITLFKQ QWEEMVNRTL EAATKAEGSS VLKYYKAEKA GFTEFPDVYM
201: LMQCTPDLSS RDCKQCLGDC VMYFRKDYMG RKGGMASLPS CYFRWDLYSF HNAFDNVTRV PAPPPRPHAQ EKESCITVKK GKSIGYGGII AIVVVFTFIN
301: LLVFIGFIKV YARRGKLNNV GSAEYSDSDG QFMLRFDLGM IVMATDDFSS ENTLGQGGFG TVYKGTFPNG QEVAVKRLTK GSGQGDMEFK NEVSLLTRLQ
401: HKNLVKLLGF CNEGDEEILV YEFVPNSSLD HFIFDEDKRS LLTWEVRFRI IEGIARGLLY LHEDSQLKII HRDLKASNIL LDAEMNPKVA DFGTARLFDS
501: DETRAETKRI AGTRGYMAPE YLNHGQISAK SDVYSFGVML LEMISGERNN SFEGEGLAAF VSFFTIFFFF E
Arabidopsis Description
CRK40Cysteine-rich receptor-like protein kinase 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYS3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.