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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY16663 Canola plasma membrane 82.42 96.64
Bra029499.1-P Field mustard plasma membrane 81.25 95.27
CDY62376 Canola plasma membrane 53.26 79.11
CDY21305 Canola cytosol 32.03 78.59
CDY16698 Canola extracellular, plasma membrane 27.86 74.31
CDX97326 Canola plasma membrane 62.24 73.31
CDX97323 Canola cytosol 51.69 72.31
CDY33543 Canola cytosol 51.56 72.13
CDX97327 Canola plasma membrane 60.42 71.06
CDY51854 Canola plasma membrane 59.9 70.34
CDX90870 Canola cytosol 48.57 69.59
CDY37174 Canola plasma membrane 59.24 69.57
CDX90866 Canola plasma membrane 57.81 68.41
CDX90867 Canola plasma membrane 54.95 66.25
CDX90869 Canola plasma membrane 56.12 66.1
CDY65897 Canola plasma membrane 52.99 65.65
CDX90868 Canola plasma membrane 53.26 64.11
CDY53873 Canola plasma membrane 52.47 63.27
CDY16662 Canola plasma membrane 53.52 62.75
CDY21307 Canola plasma membrane 49.87 58.38
CDX90871 Canola plasma membrane 49.22 57.62
CDY16665 Canola plasma membrane 47.53 56.24
CDY68796 Canola plasma membrane 47.79 55.95
CDX90872 Canola plasma membrane 46.88 55.3
CDY21309 Canola plasma membrane 45.57 54.35
CDY53877 Canola plasma membrane 45.05 54.32
CDY16664 Canola plasma membrane 45.05 54.23
CDY21304 Canola plasma membrane 18.88 49.83
CDY26975 Canola cytosol, mitochondrion, plastid 9.38 41.14
CDX94471 Canola cytosol 16.93 36.72
CDY51546 Canola plasma membrane 11.2 33.99
CDX94557 Canola plasma membrane 34.9 33.84
CDX90809 Canola mitochondrion 11.07 27.96
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.17MapMan:18.4.1.24.1Gene3D:3.30.200.20Gene3D:3.30.430.20GO:A0A078IS42
UniProt:A0A078IS42EnsemblPlants:CDY53875ProteinID:CDY53875ProteinID:CDY53875.1InterPro:GNK2InterPro:GNK2_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00011629001
InterPro:IPR000719InterPro:IPR002902InterPro:IPR038408InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF01657
ScanProsite:PS00108PFscan:PS50011PFscan:PS51473PANTHER:PTHR27002PANTHER:PTHR27002:SF348InterPro:Prot_kinase_dom
SMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EEF1A0
SEG:seg:::::
Description
BnaCnng25690DBnaCnng25690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IS42]
Coordinates
chrLK033246:-:11685..16404
Molecular Weight (calculated)
86434.9 Da
IEP (calculated)
9.646
GRAVY (calculated)
-0.296
Length
768 amino acids
Sequence
(BLAST)
001: MVKYFSLIIV LASSLLLVLQ DLEQVHALGC SGIFLNGNSS YFQNRQSLFS TLASKVVANG GFYNASLGKN PNRVHALVLC ARGYEQQACI SCVEKVTQEI
101: QTSCPNRMNS FHWDNGDGDH VSCLVRTSNQ STFKNFQLVP AAIYPSPLTI EPSKDMTLFS KQWEATVNRT VQAATEAKNI SVLQYYSAVE AEFTEFPNVY
201: MLMQCTPDIT SQDCKICLEK SGTYFKKQFW GRQGGEVSRP SGVFRWDLYA FHGAFDNITR VPVLPGGQGQ AQPPSKDSSI KGNKERSIGN GGIISIVVPA
301: LINILVFIGL IKLYTRRRQF KNKNEYSDGQ LMLRFDLGMI LMATNDFSSD NTLGQGGFGL ENWFQGILPN GQEIAVKRLT KGSGQGDMEF KNEVSLLTRL
401: QHRNLVKLLG FCNEGDEEVL VYEFVPNSSL DHFIFDEEKR SFLTWEVRCK IIEGIARGFL YLHEDSQLKI IHRDLKASNI LLDAEMNPKV ADFGTARLFN
501: TDETRAETRR LAGTRGYMAP EYVNHGQISA KSDVYSFGVM LLEIISGERN KSFEGEGIAA FAWKRWVEGR PEIIIDTFLV ENPSNEIIKL IQIGLLCVQE
601: NASKRPTMSS VIVWLGSETI KVPLPKAPAF TSKQSQSEDG IMSISNLVSS PASIISSINH LGHHHLRHRP SSSQASIVSG VVHLRRNHLR CTASEALYNP
701: DVSNVDMEPY SHWSLNFRRN SRLQRMKKRT TTKKKKEAKL RLQLQRRRKT RIKARKNPSR LIRLQSLS
Best Arabidopsis Sequence Match ( AT4G04540.1 )
(BLAST)
001: MGKYSVLMIF IASSLLIVLQ NVEIVNAVGC TGSFFNGNSS YAQNRRDLFS TLPNKVVTNG GFYNSSLGKS PNIVHAVALC GRGYEQQACI RCVDSAIQGI
101: LTTTSCLNRV DSFTWDKDEE DNVSCLVSTS NHSTFGNLEL RPSVRYQSPN SIEPSKNMTL FEQEWNAMAN RTVESATEAE TSSVLKYYSA EKAEFTEFPN
201: VYMLMQCTPD ITSQDCKTCL GECVTLFKEQ VWGRQGGEVY RPSCFFRWDL YAFHGAFDNV TRVPAPPRPQ AQGNESSITK KKGRSIGYGG IIAIVVVLTF
301: INILVFIGYI KVYGRRKESY NKINVGSAEY SDSDGQFMLR FDLGMVLAAT DEFSSENTLG QGGFGTVYKG TLLNGQEVAV KRLTKGSGQG DIEFKNEVSL
401: LTRLQHRNLV KLLGFCNEGD EQILVYEFVP NSSLDHFIFD DEKRSLLTWE MRYRIIEGIA RGLLYLHEDS QLKIIHRDLK ASNILLDAEM NPKVADFGTA
501: RLFDSDETRA ETKRIAGTRG YMAPEYLNHG QISAKSDVYS FGVMLLEMIS GERNNSFEGE GLAAFAWKRW VEGKPEIIID PFLIEKPRNE IIKLIQIGLL
601: CVQENPTKRP TMSSVIIWLG SETNIIPLPK APAFTGSRSQ SEIGAMSMSD DVFTELSCR
Arabidopsis Description
CRK39Putative cysteine-rich receptor-like protein kinase 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYS7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.