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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90870 Canola cytosol 62.85 74.81
CDY21305 Canola cytosol 36.68 74.76
CDY65897 Canola plasma membrane 71.79 73.87
CDX90867 Canola plasma membrane 73.51 73.63
CDX90866 Canola plasma membrane 74.29 73.04
CDX90869 Canola plasma membrane 73.35 71.78
CDY62376 Canola plasma membrane 53.76 66.34
CDX97323 Canola cytosol 55.8 64.85
CDY33543 Canola cytosol 55.8 64.85
CDX97326 Canola plasma membrane 65.83 64.42
CDX97327 Canola plasma membrane 65.52 64.01
CDY16663 Canola plasma membrane 65.52 63.82
CDY51854 Canola plasma membrane 64.58 63.0
CDY37174 Canola plasma membrane 63.64 62.08
CDY21304 Canola plasma membrane 28.06 61.51
CDY16698 Canola extracellular, plasma membrane 27.12 60.07
CDY53873 Canola plasma membrane 56.58 56.67
CDY16662 Canola plasma membrane 57.21 55.73
CDY53875 Canola plasma membrane 64.11 53.26
CDY21307 Canola plasma membrane 54.23 52.74
CDX90871 Canola plasma membrane 53.76 52.29
CDX90872 Canola plasma membrane 51.1 50.08
CDY16665 Canola plasma membrane 50.78 49.92
CDY68796 Canola plasma membrane 51.25 49.85
CDY21309 Canola plasma membrane 49.84 49.38
CDY53877 Canola plasma membrane 48.75 48.82
CDY16664 Canola plasma membrane 48.12 48.12
CDY26975 Canola cytosol, mitochondrion, plastid 10.66 38.86
CDX94471 Canola cytosol 20.38 36.72
CDX94557 Canola plasma membrane 39.34 31.69
CDY51546 Canola plasma membrane 12.38 31.23
CDX90809 Canola mitochondrion 12.54 26.32
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.17MapMan:18.4.1.24.1Gene3D:3.30.200.20Gene3D:3.30.430.20GO:A0A078DUI5
EnsemblPlants:CDX90868ProteinID:CDX90868ProteinID:CDX90868.1InterPro:GNK2InterPro:GNK2_sfGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00151588001InterPro:IPR000719InterPro:IPR002902InterPro:IPR038408InterPro:Kinase-like_dom_sf
PFAM:PF00069PFAM:PF01657ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS51473
PANTHER:PTHR27002PANTHER:PTHR27002:SF181InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE0344::
Description
BnaA03g25480D
Coordinates
chrLK031864:+:964652..967355
Molecular Weight (calculated)
71572.1 Da
IEP (calculated)
7.756
GRAVY (calculated)
-0.117
Length
638 amino acids
Sequence
(BLAST)
001: MGKFPAVMII LASSLLFVLH TSKVVNGAKC FGSLAINSSY AQNRRDLFST LANKVATNGG FYNASLGQYP NRVYALGLCA RGYEQKACFS CVESLTLDTQ
101: ISCGNITDSF VWDNDDEDGV SCLVRSSNHL NFENDEPRPP VTDTSIHPFE LSINMTLFMQ QWEYTVNKTL EAAIKANTSS VHKYYGAVEA EFTAFPNVYM
201: LMQCTPDITS QDCKKCLGDC LTYFREEFRG RVGETVLGTA SFPSCFFRWD LLSFNGAFDN VTRVPALPRP QAQKKGSSIP YNKGLSMHWG IITIIVVLTF
301: INLVILIGLY KVNVWRRKLN NGINGGCTEY SDSDGRFMLR FDLGMILSAT ADFSPENKLG QGGFGTVYKG ILLNGKEIAV KRLTRCSEGG VEFRNEVSLL
401: IRLQHKNLVK LLGFCNERDE KILVYEFIPN SSLDGFIFDE EKRSLLTWEV RLKIIKGIAR GLIYLHEDSH LKIIHRDLKA NNILLDTDMN PKVADFGTAR
501: LFDTDETKAE TQRIAGTRGY MAPEYLNYGQ ISTKSDVYSF GIVLLEMISG QRNNSFEGEG IATFAWKRWT EGRPEIITDP LLVKIPNKEI IKFIQTGLLC
601: VQENATRRPT MSNVIVWLGS ETITIPLPKP PAFTSRHS
Best Arabidopsis Sequence Match ( AT4G04540.1 )
(BLAST)
001: MGKYSVLMIF IASSLLIVLQ NVEIVNAVGC TGSFFNGNSS YAQNRRDLFS TLPNKVVTNG GFYNSSLGKS PNIVHAVALC GRGYEQQACI RCVDSAIQGI
101: LTTTSCLNRV DSFTWDKDEE DNVSCLVSTS NHSTFGNLEL RPSVRYQSPN SIEPSKNMTL FEQEWNAMAN RTVESATEAE TSSVLKYYSA EKAEFTEFPN
201: VYMLMQCTPD ITSQDCKTCL GECVTLFKEQ VWGRQGGEVY RPSCFFRWDL YAFHGAFDNV TRVPAPPRPQ AQGNESSITK KKGRSIGYGG IIAIVVVLTF
301: INILVFIGYI KVYGRRKESY NKINVGSAEY SDSDGQFMLR FDLGMVLAAT DEFSSENTLG QGGFGTVYKG TLLNGQEVAV KRLTKGSGQG DIEFKNEVSL
401: LTRLQHRNLV KLLGFCNEGD EQILVYEFVP NSSLDHFIFD DEKRSLLTWE MRYRIIEGIA RGLLYLHEDS QLKIIHRDLK ASNILLDAEM NPKVADFGTA
501: RLFDSDETRA ETKRIAGTRG YMAPEYLNHG QISAKSDVYS FGVMLLEMIS GERNNSFEGE GLAAFAWKRW VEGKPEIIID PFLIEKPRNE IIKLIQIGLL
601: CVQENPTKRP TMSSVIIWLG SETNIIPLPK APAFTGSRSQ SEIGAMSMSD DVFTELSCR
Arabidopsis Description
CRK39Putative cysteine-rich receptor-like protein kinase 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYS7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.