CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 2
plasma membrane 5
extracellular 3
endoplasmic reticulum 3
vacuole 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90809	Canola	mitochondrion	81.03	67.43
Bra000754.1-P	Field mustard	cytosol	88.14	62.29
AT4G11890.3	Thale cress	cytosol	68.77	49.15
CDX94471	Canola	cytosol	53.75	38.42
CDY21305	Canola	cytosol	33.6	27.16
CDX97323	Canola	cytosol	35.97	16.58
CDY33543	Canola	cytosol	35.97	16.58
CDX90870	Canola	cytosol	30.43	14.37
CDY53873	Canola	plasma membrane	35.97	14.29
CDY37174	Canola	plasma membrane	36.76	14.22
CDY65897	Canola	plasma membrane	33.99	13.87
CDY51854	Canola	plasma membrane	35.57	13.76
CDY16663	Canola	plasma membrane	35.57	13.74
CDX97326	Canola	plasma membrane	35.18	13.65
CDY16662	Canola	plasma membrane	35.18	13.59
CDX97327	Canola	plasma membrane	34.78	13.48
CDY68796	Canola	plasma membrane	34.78	13.41
CDY16665	Canola	plasma membrane	33.99	13.25
CDY16664	Canola	plasma membrane	33.2	13.17
CDX90869	Canola	plasma membrane	33.6	13.04
CDY53877	Canola	plasma membrane	32.81	13.03
CDY21307	Canola	plasma membrane	33.6	12.96
CDX90866	Canola	plasma membrane	33.2	12.94
CDX90871	Canola	plasma membrane	32.81	12.65
CDY21309	Canola	plasma membrane	32.02	12.58
CDX90867	Canola	plasma membrane	31.62	12.56
CDX90872	Canola	plasma membrane	32.02	12.44
CDX90868	Canola	plasma membrane	31.23	12.38
CDY53875	Canola	plasma membrane	33.99	11.2
CDY62376	Canola	plasma membrane	17.39	8.51
CDX94557	Canola	plasma membrane	22.92	7.32
CDY26975	Canola	cytosol, mitochondrion, plastid	3.16	4.57
CDY21304	Canola	plasma membrane	0.4	0.34
CDY16698	Canola	extracellular, plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	GO:A0A078INN1	UniProt:A0A078INN1	EnsemblPlants:CDY51546	ProteinID:CDY51546
ProteinID:CDY51546.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00003724001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PFscan:PS50011	PANTHER:PTHR27002	PANTHER:PTHR27002:SF363	InterPro:Prot_kinase_dom	SUPFAM:SSF56112
UniParc:UPI0004EDE65C	SEG:seg	:	:	:	:

Description

BnaC03g72920DBnaC03g72920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078INN1]

Coordinates

chrLK033005:+:12905..14398

Molecular Weight (calculated)

28872.7 Da

IEP (calculated)

5.852

GRAVY (calculated)

-0.113

Length

253 amino acids

Sequence
(BLAST)

001: MTTFSTLFYF FFCSRKICVN GQLIGHVQSH QLSWEMCRNI VQGIARGLRY IHEESQLWVI HRDINPTNIL LDLEFKPKIA GFALARMMQQ GESEGESTVI
101: AGTIGFLDPE YMRTGRVSIK SDVYAFGVTI LMIISRRRAY SSGGEESLIE HVMRCWNRGE AIYVVHEVMR EQEREDSISE VLRYIHIALL CIDENAETRP
201: TIDKVLHWFS CCSTPLPEPT ISDRFLVEAE TNLSFSPSLS PGYSSDMSPT SSR

Best Arabidopsis Sequence Match ( AT4G11890.3 )
(BLAST)

001: MAVTSLLDTV FRRRKKKSTE FISYTAVFEF DLDTIKAATN DFSELVGRGG FGFVYKGRLQ NGQEIAVKIL STSSIRTERQ FHNELIILSK LKHKNLINLL
101: GFCTKRDQHG LVYEFMPNSS LDCFILDPHR AAQLNWEMCR NIIDGIARGL RYLHEESGLW VVHRDIKPGN ILLDSDLKPK IVGFELARTM QQGENAAETT
201: EIVGTVGYLD PEYIRSGRVS VKSDVYAFGV TILTIISRRK AWSVDGDSLI KYVRRCWNRG EAIDVIHEVM REEEREYSIS EILRYIHIAL LCVDENAERR
301: PNIDKVLHWF SCFSTPLPDP TFGNRFLVEE ETNWPWSPSL SPGHSSVTSP ISSR

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JPT7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.