CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16698	Canola	extracellular, plasma membrane	42.27	42.71
CDX90870	Canola	cytosol	61.17	33.21
Bra017551.1-P	Field mustard	plasma membrane	65.29	31.46
CDX90869	Canola	plasma membrane	70.1	31.29
CDX90867	Canola	plasma membrane	68.04	31.08
CDX90866	Canola	plasma membrane	64.26	28.81
CDX90868	Canola	plasma membrane	61.51	28.06
CDY62376	Canola	plasma membrane	49.83	28.05
CDY65897	Canola	plasma membrane	56.36	26.45
CDY16663	Canola	plasma membrane	50.52	22.44
CDX97326	Canola	plasma membrane	49.48	22.09
CDY51854	Canola	plasma membrane	48.8	21.71
CDX97327	Canola	plasma membrane	48.45	21.59
CDY37174	Canola	plasma membrane	48.45	21.56
CDY33543	Canola	cytosol	37.8	20.04
CDX97323	Canola	cytosol	37.46	19.85
CDY53875	Canola	plasma membrane	49.83	18.88
CDY16662	Canola	plasma membrane	38.14	16.95
CDY53873	Canola	plasma membrane	36.77	16.8
CDY21307	Canola	plasma membrane	37.8	16.77
CDX90872	Canola	plasma membrane	36.77	16.44
CDX90871	Canola	plasma membrane	35.74	15.85
CDY21309	Canola	plasma membrane	35.05	15.84
CDY16665	Canola	plasma membrane	31.96	14.33
CDY68796	Canola	plasma membrane	31.62	14.02
CDY16664	Canola	plasma membrane	27.49	12.54
CDY53877	Canola	plasma membrane	27.15	12.4
CDX94557	Canola	plasma membrane	28.52	10.48
CDY26975	Canola	cytosol, mitochondrion, plastid	4.12	6.86
CDY21305	Canola	cytosol	2.41	2.24
CDX94471	Canola	cytosol	2.06	1.69
CDY51546	Canola	plasma membrane	0.34	0.4
CDX90809	Canola	mitochondrion	0.34	0.33

Protein Annotations

EnsemblPlants:CDY21304	EnsemblPlantsGene:GSBRNA2T00015637001	Gene3D:3.30.430.20	GO:A0A078G7C5	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:GNK2	InterPro:GNK2_sf	InterPro:IPR002902	InterPro:IPR038408	PANTHER:PTHR32099
PFAM:PF01657	PFscan:PS51473	ProteinID:CDY21304	ProteinID:CDY21304.1	SEG:seg	SignalP:SignalP-TM
TMHMM:TMhelix	UniParc:UPI0004EDF631	UniProt:A0A078G7C5	MapMan:35.1	:	:

Description

BnaC03g29880DBnaC03g29880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7C5]

Coordinates

chrLK032119:+:379546..380676

Molecular Weight (calculated)

32359.5 Da

IEP (calculated)

8.862

GRAVY (calculated)

0.072

Length

291 amino acids

Sequence
(BLAST)

001: MGKFPGLMII LASSLLFFLQ TLEPATAATL RIAAISSLLL LIKSSLTAEC TLSQYPNKVY ALGLCARGFK SKACLSCLER LTLETQRDCP NIMDSFVWGS
101: DDEDRVSCLV RSSNHSFGNL ELSPPVTGIS PDQIEPSINM TLFMQQWEYT VNNTLVAATK ANTSSVHKYY SAVKAEFTAF PNVYMLTQCT PDITSQDCKQ
201: CLEACLKYFR EQFRGRTGGM LQEKGSSIPN KKGRSMHRGI ITIIVVFTFF NLVVFIGFYK VKSWTRKLNN GTNGKCTLIL APVKLYNDLL G

Best Arabidopsis Sequence Match ( AT4G04540.1 )
(BLAST)

001: MGKYSVLMIF IASSLLIVLQ NVEIVNAVGC TGSFFNGNSS YAQNRRDLFS TLPNKVVTNG GFYNSSLGKS PNIVHAVALC GRGYEQQACI RCVDSAIQGI
101: LTTTSCLNRV DSFTWDKDEE DNVSCLVSTS NHSTFGNLEL RPSVRYQSPN SIEPSKNMTL FEQEWNAMAN RTVESATEAE TSSVLKYYSA EKAEFTEFPN
201: VYMLMQCTPD ITSQDCKTCL GECVTLFKEQ VWGRQGGEVY RPSCFFRWDL YAFHGAFDNV TRVPAPPRPQ AQGNESSITK KKGRSIGYGG IIAIVVVLTF
301: INILVFIGYI KVYGRRKESY NKINVGSAEY SDSDGQFMLR FDLGMVLAAT DEFSSENTLG QGGFGTVYKG TLLNGQEVAV KRLTKGSGQG DIEFKNEVSL
401: LTRLQHRNLV KLLGFCNEGD EQILVYEFVP NSSLDHFIFD DEKRSLLTWE MRYRIIEGIA RGLLYLHEDS QLKIIHRDLK ASNILLDAEM NPKVADFGTA
501: RLFDSDETRA ETKRIAGTRG YMAPEYLNHG QISAKSDVYS FGVMLLEMIS GERNNSFEGE GLAAFAWKRW VEGKPEIIID PFLIEKPRNE IIKLIQIGLL
601: CVQENPTKRP TMSSVIIWLG SETNIIPLPK APAFTGSRSQ SEIGAMSMSD DVFTELSCR

Arabidopsis Description

CRK39Putative cysteine-rich receptor-like protein kinase 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYS7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.