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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90867 Canola plasma membrane 86.5 88.54
CDY21305 Canola cytosol 42.48 88.5
Bra000797.1-P Field mustard plasma membrane 81.6 87.5
CDX90870 Canola cytosol 68.86 83.77
CDX90866 Canola plasma membrane 77.3 77.66
CDY65897 Canola plasma membrane 72.39 76.13
CDX90868 Canola plasma membrane 71.78 73.35
CDX97323 Canola cytosol 59.51 70.67
CDY33543 Canola cytosol 59.36 70.49
CDY21304 Canola plasma membrane 31.29 70.1
CDX97326 Canola plasma membrane 69.79 69.79
CDX97327 Canola plasma membrane 69.33 69.22
CDY16663 Canola plasma membrane 67.64 67.33
CDY62376 Canola plasma membrane 52.76 66.54
CDY51854 Canola plasma membrane 66.72 66.51
CDY37174 Canola plasma membrane 66.26 66.06
CDY53873 Canola plasma membrane 59.66 61.07
CDY16662 Canola plasma membrane 60.43 60.15
CDY16698 Canola extracellular, plasma membrane 24.85 56.25
CDY53875 Canola plasma membrane 66.1 56.12
CDY21307 Canola plasma membrane 56.13 55.79
CDX90871 Canola plasma membrane 55.21 54.88
CDX90872 Canola plasma membrane 53.53 53.61
CDY21309 Canola plasma membrane 52.15 52.8
CDY16665 Canola plasma membrane 52.45 52.7
CDY68796 Canola plasma membrane 52.76 52.44
CDY53877 Canola plasma membrane 49.23 50.39
CDY16664 Canola plasma membrane 49.08 50.16
CDY26975 Canola cytosol, mitochondrion, plastid 10.58 39.43
CDX94471 Canola cytosol 19.94 36.72
CDY51546 Canola plasma membrane 13.04 33.6
CDX94557 Canola plasma membrane 38.65 31.82
CDX90809 Canola mitochondrion 13.04 27.96
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.17MapMan:18.4.1.24.1Gene3D:3.30.200.20Gene3D:3.30.430.20GO:A0A078DQW9
EnsemblPlants:CDX90869ProteinID:CDX90869ProteinID:CDX90869.1InterPro:GNK2InterPro:GNK2_sfGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00151589001InterPro:IPR000719InterPro:IPR002902InterPro:IPR038408InterPro:Kinase-like_dom_sf
PFAM:PF00069PFAM:PF01657ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS51473
PANTHER:PTHR27002PANTHER:PTHR27002:SF181InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EDCB54SEG:seg:
Description
BnaA03g25490D
Coordinates
chrLK031864:-:972050..974642
Molecular Weight (calculated)
72896.2 Da
IEP (calculated)
8.353
GRAVY (calculated)
-0.098
Length
652 amino acids
Sequence
(BLAST)
001: MGKFPSLMIM LASSLVFLLK TLEIVNGAMC YGSLAGNSSY AQNRKNLFST LSDKVLANGG FYNVSLGQYP NRVYALGLCA RGFKPKACSS CLERLSLETQ
101: RDCPNIMDSF VWGVDDEELV SCLVRSSNHS FGNLEISPPD IGISPDHIGP LINMTLFMLQ WESTVNRTLT AATKANASSA HKYYSASYAE FTAFPNVYML
201: MQCTPDITSQ GCKQCLEACL KYFREQFPGR TVGMATFPSC FFRWDLFSFY GAFLNVTRVP ALPRPQDQEK GSSIPDKKGR SMNRGIITII VVLTFIHLFV
301: FIGFYKVIAR RRKLNNGKNV GGAEYYDSDG QFMLRYDLCM ILSATADFSP KNKLGQGGFG TVYKGKLLNG KEIAVKRLTR GSEGGIEFKN EVSLLTRLQH
401: KNLVKLLGFC NEGDEKILVY EFVPHSSLDR FIFDEEKRSL LTWEVRFKII EGIARGLVYL HEDSQLMIIH RDLKASNVLL DAEMNPKVAD FGTARLFDTD
501: ETRAETKRIA GTRGYMAPEY MNHGRISAKT DVYSFGVVLL EMISGKRNNS FEGEGIAAFA WKRWSEGRPD VIIDPLLVEK PCVQIIKLIQ TGLLCVQEEA
601: TKRPTMSSVM VWLGSETITI PSPKGPAFTE SYSQSEDGTM SMSIVFTELS SR
Best Arabidopsis Sequence Match ( AT4G04570.1 )
(BLAST)
001: MGKCSALMIF LSSSLLLVLQ TLHVVNAVKC FGNSFNGNSS TFAQNRQKLF PTLADKVIIN DGFYNASLGQ DPDKVYALVS CARGYDQDAC YNCVQSLTQN
101: TLTDCRSRRD SFIWGGNDDV TCLVRSSNQS TFGSVQLKPP VVWPSPDTIE SSKNITLFKQ QWEEMVNRTL EAATKAEGSS VLKYYKAEKA GFTEFPDVYM
201: LMQCTPDLSS RDCKQCLGDC VMYFRKDYMG RKGGMASLPS CYFRWDLYSF HNAFDNVTRV PAPPPRPHAQ EKESCITVKK GKSIGYGGII AIVVVFTFIN
301: LLVFIGFIKV YARRGKLNNV GSAEYSDSDG QFMLRFDLGM IVMATDDFSS ENTLGQGGFG TVYKGTFPNG QEVAVKRLTK GSGQGDMEFK NEVSLLTRLQ
401: HKNLVKLLGF CNEGDEEILV YEFVPNSSLD HFIFDEDKRS LLTWEVRFRI IEGIARGLLY LHEDSQLKII HRDLKASNIL LDAEMNPKVA DFGTARLFDS
501: DETRAETKRI AGTRGYMAPE YLNHGQISAK SDVYSFGVML LEMISGERNN SFEGEGLAAF AWKRWVEGKP EIIIDPFLIE NPRNEIIKLI QIGLLCVQEN
601: STKRPTMSSV IIWLGSETII IPLPKAPAFT WIRSQSESGA MSLSDDVFTE LSCR
Arabidopsis Description
CRK40Cysteine-rich receptor-like protein kinase 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYS3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.