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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • extracellular 4
  • golgi 4
  • plasma membrane 7
  • endoplasmic reticulum 4
  • vacuole 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY21307 Canola plasma membrane 94.97 94.97
Bra000799.1-P Field mustard plasma membrane 89.18 89.18
AT4G04510.2 Thale cress plasma membrane 71.65 72.31
CDY21305 Canola cytosol 31.4 65.81
CDX97323 Canola cytosol 52.59 62.84
CDY33543 Canola cytosol 52.44 62.66
CDY62376 Canola plasma membrane 48.02 60.93
CDY53873 Canola plasma membrane 57.01 58.71
CDY51854 Canola plasma membrane 58.38 58.56
CDY16663 Canola plasma membrane 58.38 58.47
CDY37174 Canola plasma membrane 57.93 58.1
CDY16665 Canola plasma membrane 57.47 58.09
CDY16662 Canola plasma membrane 57.77 57.86
CDY68796 Canola plasma membrane 57.47 57.47
CDX90870 Canola cytosol 46.95 57.46
CDX97326 Canola plasma membrane 57.01 57.36
CDX90866 Canola plasma membrane 56.71 57.32
CDX97327 Canola plasma membrane 56.86 57.12
CDX90867 Canola plasma membrane 53.96 55.57
CDY65897 Canola plasma membrane 52.44 55.48
CDX90869 Canola plasma membrane 54.88 55.21
CDX90872 Canola plasma membrane 54.57 54.99
CDY21309 Canola plasma membrane 53.96 54.97
CDY53877 Canola plasma membrane 53.2 54.79
CDY16664 Canola plasma membrane 52.74 54.23
CDY16698 Canola extracellular, plasma membrane 23.63 53.82
CDX90868 Canola plasma membrane 52.29 53.76
CDY53875 Canola plasma membrane 57.62 49.22
CDY26975 Canola cytosol, mitochondrion, plastid 11.13 41.71
CDX94471 Canola cytosol 21.65 40.11
CDY21304 Canola plasma membrane 15.85 35.74
CDX94557 Canola plasma membrane 39.63 32.83
CDY51546 Canola plasma membrane 12.65 32.81
CDX90809 Canola mitochondrion 13.41 28.95
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.17MapMan:18.4.1.24.1Gene3D:3.30.200.20Gene3D:3.30.430.20GO:A0A078DNN6
EnsemblPlants:CDX90871ProteinID:CDX90871ProteinID:CDX90871.1InterPro:GNK2InterPro:GNK2_sfGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00151593001InterPro:IPR000719InterPro:IPR002902InterPro:IPR038408InterPro:Kinase-like_dom_sf
PFAM:PF01657PFAM:PF07714ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS51473
PANTHER:PTHR27002PANTHER:PTHR27002:SF348InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE61AASEG:seg
Description
BnaA03g25510D
Coordinates
chrLK031864:+:1002714..1005428
Molecular Weight (calculated)
73201.3 Da
IEP (calculated)
7.724
GRAVY (calculated)
-0.051
Length
656 amino acids
Sequence
(BLAST)
001: MKKIATIFLF ISLLIETLNG VKAGFLCVGD TFLANSSYGQ NRNSVFSSLA SQVITNRGFY NASLNSVHAV ALCRRGYERQ ACINCVEKAI QLIKQRCSDR
101: VESFNWDGDD ADQVSCLVRT TNNSTFQKLD LGPATLDASP LNIGSSAKNM TLFRQEWEAT VNRTLEATTV NTSASVLKYY GVANAEFVEF PNVYMMMQCT
201: PDITSGECKS CLEECVTYFR DTSWGKQGGT VCRPSCLFRW DLYPFYGAFA NITRVPAPPR PLIPQAHAIS VTSLKGKIIA IVVIPTVINL LVLLGLIRAY
301: RQIKKSKEET SVWTEQDCIS DSQFMLKFDL TMVLLATGDF SLENKIGQGG FGSVYKGILP SGQEIAVKRL TRGSGQGEIE FRNEVSLLTR LQHRNLVKLL
401: GFCSEGEEDI LIYEHVPNSS LDHFIFNEEK RVLLTWNVRY KIIEGVARGL LYLHEDSQLR IIHRDLKASN VLLDAEMNPK VSDFGMARLF DMDQTRGVTR
501: RRVGTFGYMA PEYIKNGRLS AKTDVYSFGV VLLEMITGQS NNNYFEAMGL PAYAWKCWVA GEAASIIDPV LSRTPTNEIL RFIHIGLLCV QENVAKRPTM
601: SFVIQWLGSD TIAIPLPTTA AFTTTELHKI DEMNQAKGEA STQSLNKLSV TELSPR
Best Arabidopsis Sequence Match ( AT4G04510.2 )
(BLAST)
001: MIMKNSAAIF LTSSLILLLQ TLHGVKAGFI CVGSSFPTNS SYQKNRDSLF STLSDKVTTN GGFYNASLDG VHVVGLCRRD YDRQGCINCV EESIRQIKTS
101: CSNRVQSFHC NSDDRERVSC LVRTTDQSTY RILELGPATN DPSPVAIDTF AKNMTLFRQE WEAMVDRTLE AVTIDNSTTV LKYYGALKSE FSEFPNVYMM
201: MQCTPDINSG ACKRCLQASV TYFRDQNWGR QGGGICRPSC VFRWEFYPFY GAFANVTRVP APPRALIPRT EAISITRLKG GIIAIFVVPI VINLLVFIGL
301: IRAYTRIRKS YNGINEAQYD YGGQSKLRFD FRMILTATDD FSFENKIGQG GFGSVYKGKL PGGEEIAVKR LTRGSGQGEI EFRNEVLLLT RLQHRNLVKL
401: LGFCNEGDEE ILVYEFVPNS SLDHFIFDEE KRLLLTWDMR ARIIEGVARG LVYLHEDSQL RIIHRDLKAS NILLDAYMNP KVADFGMARL FNMDQTRAVT
501: RKVVGTFGYM APEYVRNRTF SVKTDVYSFG VVLLEMITGR SNKNYFEALG LPAYAWKCWV AGEAASIIDH VLSRSRSNEI MRFIHIGLLC VQENVSKRPT
601: MSLVIQWLGS ETIAIPLPTV AGFTNASYQA EHEAGTLSLN ELSITELSPR
Arabidopsis Description
CRK38cysteine-rich RLK (RECEPTOR-like protein kinase) 38 [Source:TAIR;Acc:AT4G04510]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.