CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16698	Canola	extracellular, plasma membrane	53.58	96.18
CDY16663	Canola	plasma membrane	79.69	62.9
CDX97326	Canola	plasma membrane	74.47	59.05
CDY51854	Canola	plasma membrane	74.08	58.56
CDY37174	Canola	plasma membrane	73.31	57.95
CDX97327	Canola	plasma membrane	72.53	57.43
CDX97323	Canola	cytosol	60.73	57.19
CDY33543	Canola	cytosol	60.54	57.01
CDX90867	Canola	plasma membrane	68.47	55.57
CDX90866	Canola	plasma membrane	69.05	55.01
CDX90868	Canola	plasma membrane	66.34	53.76
CDX90870	Canola	cytosol	55.71	53.73
CDY53875	Canola	plasma membrane	79.11	53.26
CDX90869	Canola	plasma membrane	66.54	52.76
CDY65897	Canola	plasma membrane	62.86	52.42
CDY21304	Canola	plasma membrane	28.05	49.83
CDY16662	Canola	plasma membrane	61.9	48.85
CDY53873	Canola	plasma membrane	59.96	48.67
CDY21307	Canola	plasma membrane	61.51	48.48
CDX90871	Canola	plasma membrane	60.93	48.02
CDX90872	Canola	plasma membrane	59.77	47.47
CDY21305	Canola	cytosol	28.63	47.28
CDY21309	Canola	plasma membrane	56.87	45.65
CDY16665	Canola	plasma membrane	54.35	43.3
CDY68796	Canola	plasma membrane	54.74	43.14
CDY26975	Canola	cytosol, mitochondrion, plastid	13.93	41.14
CDY53877	Canola	plasma membrane	49.32	40.03
CDY16664	Canola	plasma membrane	49.32	39.97
CDX94557	Canola	plasma membrane	50.48	32.95
CDX94471	Canola	cytosol	17.41	25.42
CDY51546	Canola	plasma membrane	8.51	17.39
CDX90809	Canola	mitochondrion	8.9	15.13

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.17	Gene3D:3.30.200.20	Gene3D:3.30.430.20	GO:A0A078JD97	UniProt:A0A078JD97
EnsemblPlants:CDY62376	ProteinID:CDY62376	ProteinID:CDY62376.1	InterPro:GNK2	InterPro:GNK2_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00036208001	InterPro:IPR000719
InterPro:IPR002902	InterPro:IPR038408	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF01657	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51473	PANTHER:PTHR27002	PANTHER:PTHR27002:SF348	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0004EF47DC	SEG:seg	:	:	:	:

Description

BnaCnng40100DBnaCnng40100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JD97]

Coordinates

chrLK034134:-:61..2264

Molecular Weight (calculated)

57858.0 Da

IEP (calculated)

6.957

GRAVY (calculated)

-0.232

Length

517 amino acids

Sequence
(BLAST)

001: MGLNPVLIIF LSSSLLIVLQ NLDVANAVTC SGSFINGNSS YFQNRDNLFS TLASKVVANG GFYNASLGKS PNSVHALVLC KRGYEQQDCI SCVEKVTQEI
101: QTGCPNRMDS FKWDNDDGDH VNCLVRSSNH STFKNFQLVP AVIYPNALTI EPSKDMTLFR QQWEATVNRT IEDAAEAETS SMLKYYSAVE AEFTEFPNVY
201: MLMQCTPDIT SRECKICLEK CATYFKKQFW GRQGGEVSRP SCVFRWDLYA FHGAFDNVTR VPAPPGPQAQ ANGTFITDKK GRSIRYSGTI AIIVVPSLIN
301: LLVFIGLIKF YARRKNSYNG CNVGTAEYSD SNGQPMLRFD LGSILMATND FSSERKLGQG GFGTVHKGTL PNGQEIAVKR LTKGSGQGDL EFKNEVSLLT
401: RLQHRNLVKL LGFCNEGDEE ILIYEFVPNS SLDHFIFDEE KRSLLTWEVR FKIIEGIARG LLYLHEDSQL KIIHRDLKAS NILLDAEMNP KVADFGTARL
501: FEADETRAET RRIAGTR

Best Arabidopsis Sequence Match ( AT4G04540.2 )
(BLAST)

001: MGKYSVLMIF IASSLLIVLQ NVEIVNAVGC TGSFFNGNSS YAQNRRDLFS TLPNKVVTNG GFYNSSLGKS PNIVHAVALC GRGYEQQACI RCVDSAIQGI
101: LTTTSCLNRV DSFTWDKDEE DNVSCLVSTS NHSTFGNLEL RPSVRYQSPN SIEPSKNMTL FEQEWNAMAN RTVESATEAE TSSVLKYYSA EKAEFTEFPN
201: VYMLMQCTPD ITSQDCKTCL GECVTLFKEQ VWGRQGGEVY RPSCFFRWDL YAFHGAFDNV TRVPAPPRPQ AQGNESSITK KKGRSIGYGG IIAIVVVLTF
301: INILVFIGYI KVYGRRKESY NKINVGSAEY SDSDGQFMLR FDLGMVLAAT DEFSSENTLG QGGFGTVYKG TLLNGQEVAV KRLTKGSGQG DIEFKNEVSL
401: LTRLQHRNLV KLLGFCNEGD EQILVYEFVP NSSLDHFIFD DEKRSLLTWE MRYRIIEGIA RGLLYLHEDS QLKIIHRDLK ASNILLDAEM NPKVADFGTA
501: RLFDSDETRA ETKRIAGTRG YMAPEYLNHG QISAKSDVYS FGVMLLEMIS GERNNSFEGE GLAAFVSFFT YIYFFEYQEV LGRNHSM

Arabidopsis Description

CRK39Putative cysteine-rich receptor-like protein kinase 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYS7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.