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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra029500.1-P Field mustard plasma membrane 98.17 98.32
CDY53873 Canola plasma membrane 94.35 97.02
CDY21305 Canola cytosol 38.78 81.15
CDY33543 Canola cytosol 57.56 68.67
CDX97323 Canola cytosol 57.25 68.31
CDX90870 Canola cytosol 53.59 65.49
CDY51854 Canola plasma membrane 64.89 64.98
CDY37174 Canola plasma membrane 64.27 64.37
CDX97326 Canola plasma membrane 63.21 63.5
CDY16663 Canola plasma membrane 63.36 63.36
CDX97327 Canola plasma membrane 62.44 62.63
CDX90866 Canola plasma membrane 61.68 62.25
CDY62376 Canola plasma membrane 48.85 61.9
CDX90867 Canola plasma membrane 59.85 61.54
CDX90869 Canola plasma membrane 60.15 60.43
CDY65897 Canola plasma membrane 57.1 60.32
CDY21307 Canola plasma membrane 57.86 57.77
CDX90871 Canola plasma membrane 57.86 57.77
CDX90868 Canola plasma membrane 55.73 57.21
CDY68796 Canola plasma membrane 57.1 57.01
CDY16665 Canola plasma membrane 56.49 57.01
CDX90872 Canola plasma membrane 53.74 54.07
CDY53875 Canola plasma membrane 62.75 53.52
CDY21309 Canola plasma membrane 52.52 53.42
CDY16664 Canola plasma membrane 51.6 52.98
CDY53877 Canola plasma membrane 51.15 52.59
CDX94557 Canola plasma membrane 56.49 46.72
CDY16698 Canola extracellular, plasma membrane 20.46 46.53
CDY26975 Canola cytosol, mitochondrion, plastid 12.06 45.14
CDX94471 Canola cytosol 20.76 38.42
CDY21304 Canola plasma membrane 16.95 38.14
CDY51546 Canola plasma membrane 13.59 35.18
CDX90809 Canola mitochondrion 13.44 28.95
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.17MapMan:18.4.1.24.1Gene3D:3.30.200.20Gene3D:3.30.430.20GO:A0A078FV40
UniProt:A0A078FV40EnsemblPlants:CDY16662ProteinID:CDY16662ProteinID:CDY16662.1InterPro:GNK2InterPro:GNK2_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00094502001
InterPro:IPR000719InterPro:IPR002902InterPro:IPR038408InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF01657
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS51473PANTHER:PTHR27002PANTHER:PTHR27002:SF181
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0004EEECEASEG:seg:::
Description
BnaA09g20400DBnaA09g20400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FV40]
Coordinates
chrLK032066:-:365164..368714
Molecular Weight (calculated)
73284.7 Da
IEP (calculated)
6.413
GRAVY (calculated)
-0.220
Length
655 amino acids
Sequence
(BLAST)
001: MRKLCDVILF SCFLLLTVVD VEADCEGSLF AVNSTYSENL NSLFSSLASN VTANDGFYNT STGEGSNKVY GLALCGRGYK KQACVNCVEQ AIQESQQRCP
101: NRMKSFRWTT RDNDNASCLV RYANHSVSAK LELFPPTLSD NPLNIEEPKS LKLFRREWEA LTNLTMQSAT SAPENSSVVL KFYSVVRAEF TEFANVYMMM
201: QCTPDILSSE CNKCLSQCVL NFQNNNWGSQ GGAGRLPSCY FRWDLYPICG SSENMTRVSM ISRATTLPQG DTVSQPENDK KGKGIRNGTI AIIVVPTVIN
301: LFVFVGLFII FDQRRKAYNK NINECFDSDG QSMLRFDLGM ILSATNEFSP ENKLGQGGFG TVYKGILPNG QEIAVKRLVS GSGQGDTEFK NEVSLLTRLQ
401: HKNLVKLLGF CHEGDEEILV YELVPNSSLD HFIFADKAKR SLLTWEVRFK IIEGVARGLL YLHEDSQLKI IHRDLKASNI LLDAEMNPKV ADFGTARLFE
501: ADETRAETRR IAGTRGYMAP EYLNHGQIST KSDVFSFGVM LLEMISGERN NSFEGEGLAA FTWKRWVEGK PETVIDPLLM KNPRNEIIKL IQIGLLCVQE
601: NAAKRPTMSS VIVWLGSETI IIPLPRAPAF TRDRSQSENS NMSTNNDIFT DLSCR
Best Arabidopsis Sequence Match ( AT4G04510.2 )
(BLAST)
001: MIMKNSAAIF LTSSLILLLQ TLHGVKAGFI CVGSSFPTNS SYQKNRDSLF STLSDKVTTN GGFYNASLDG VHVVGLCRRD YDRQGCINCV EESIRQIKTS
101: CSNRVQSFHC NSDDRERVSC LVRTTDQSTY RILELGPATN DPSPVAIDTF AKNMTLFRQE WEAMVDRTLE AVTIDNSTTV LKYYGALKSE FSEFPNVYMM
201: MQCTPDINSG ACKRCLQASV TYFRDQNWGR QGGGICRPSC VFRWEFYPFY GAFANVTRVP APPRALIPRT EAISITRLKG GIIAIFVVPI VINLLVFIGL
301: IRAYTRIRKS YNGINEAQYD YGGQSKLRFD FRMILTATDD FSFENKIGQG GFGSVYKGKL PGGEEIAVKR LTRGSGQGEI EFRNEVLLLT RLQHRNLVKL
401: LGFCNEGDEE ILVYEFVPNS SLDHFIFDEE KRLLLTWDMR ARIIEGVARG LVYLHEDSQL RIIHRDLKAS NILLDAYMNP KVADFGMARL FNMDQTRAVT
501: RKVVGTFGYM APEYVRNRTF SVKTDVYSFG VVLLEMITGR SNKNYFEALG LPAYAWKCWV AGEAASIIDH VLSRSRSNEI MRFIHIGLLC VQENVSKRPT
601: MSLVIQWLGS ETIAIPLPTV AGFTNASYQA EHEAGTLSLN ELSITELSPR
Arabidopsis Description
CRK38cysteine-rich RLK (RECEPTOR-like protein kinase) 38 [Source:TAIR;Acc:AT4G04510]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.