Factsheet for Bra029500.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16662	Canola	plasma membrane	98.32	98.17
Bra018496.1-P	Field mustard	cytosol	57.19	68.12
Bra018492.1-P	Field mustard	cytosol	52.6	65.9
Bra029470.1-P	Field mustard	plasma membrane	62.54	64.41
Bra022095.1-P	Field mustard	plasma membrane	64.37	64.37
Bra029499.1-P	Field mustard	plasma membrane	63.76	63.66
Bra000797.1-P	Field mustard	plasma membrane	59.17	63.65
Bra000796.1-P	Field mustard	plasma membrane	59.17	63.65
Bra018493.1-P	Field mustard	plasma membrane	63.15	63.34
Bra017552.1-P	Field mustard	plasma membrane	58.26	59.72
Bra017551.1-P	Field mustard	plasma membrane	55.05	59.6
Bra029495.1-P	Field mustard	plasma membrane	56.42	56.86
Bra000799.1-P	Field mustard	plasma membrane	55.5	55.34
Bra000800.1-P	Field mustard	plasma membrane	53.52	53.93
Bra029496.1-P	Field mustard	plasma membrane	50.76	52.12
Bra000798.1-P	Field mustard	extracellular, plasma membrane	20.49	48.73
Bra017549.1-P	Field mustard	extracellular	5.35	38.89
Bra000754.1-P	Field mustard	cytosol	20.95	38.27
Bra029425.1-P	Field mustard	cytosol	11.47	35.38

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.17	MapMan:18.4.1.24.1	Gene3D:3.30.200.20	Gene3D:3.30.430.20	EnsemblPlantsGene:Bra029500
EnsemblPlants:Bra029500.1	EnsemblPlants:Bra029500.1-P	InterPro:GNK2	InterPro:GNK2_sf	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002902	InterPro:IPR038408
InterPro:Kinase-like_dom_sf	UniProt:M4EL33	PFAM:PF01657	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS51473	PANTHER:PTHR27002	PANTHER:PTHR27002:SF181	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI00025426FF	SEG:seg	:	:	:	:

Description

AT4G04540 (E=5e-234) | protein kinase family protein

Coordinates

chrA09:-:17529171..17532980

Molecular Weight (calculated)

73218.5 Da

IEP (calculated)

6.415

GRAVY (calculated)

-0.223

Length

654 amino acids

Sequence
(BLAST)

001: MRKLCDVILF SCLLLLTFVD VEADCEGSLF AVNSTYSENL NSLFSSLASN VTANDGFYNT STGEGSNKVY GLALCGRGYK KQACVSCVEQ AIQESQQRCP
101: NRMKSFRWTT RDNDNVSCLV RYANHSVSAK LELFPPTLSD NPLNIEEPKS LKLFRREWEA LTNLTMQSAT SAPENSSVVL KFYSVVRAEF TEFANVYMMM
201: QCTPDILSSE CNKCLSQCVL NFQNNNWGSQ GGAGRLPSCY FRWDLYFIPG SSENMTRVSM VSRATTLPQG DTVSQPENDK KGKRIGNGTI AIIVVPTVIN
301: VFVFVGLFII FDQRRKAYNK NINECFDSDG QSMSRFDLGM ILSATNEFSP ENKLGQGGFG TVYKGILPNG QEIAVKRLVS GSGQGDTEFK NEVSLLTRLQ
401: HKNLVKLLGF CHEGDEEILV YELVPNSSLD HFIFDKAKRS LLTWEVRFKI IEGVARGLLY LHEDSQLKII HRDLKASNIL LDAEMNPKVA DFGTARLFEA
501: DETRAETRRI AGTRGYMAPE YLNHGQISTK SDVFSFGVML LEMISGERNN SFEGEGLAAF TWKRWVEGKP ETVIDPLLMK NPRNEIIKLI QIGLLCVQEN
601: AAKRPTMSSV IVWLGSETII IPLPRAPAFT RDRSQSENSN MSTNNDIFTD LSCR

Best Arabidopsis Sequence Match ( AT4G04510.2 )
(BLAST)

001: MIMKNSAAIF LTSSLILLLQ TLHGVKAGFI CVGSSFPTNS SYQKNRDSLF STLSDKVTTN GGFYNASLDG VHVVGLCRRD YDRQGCINCV EESIRQIKTS
101: CSNRVQSFHC NSDDRERVSC LVRTTDQSTY RILELGPATN DPSPVAIDTF AKNMTLFRQE WEAMVDRTLE AVTIDNSTTV LKYYGALKSE FSEFPNVYMM
201: MQCTPDINSG ACKRCLQASV TYFRDQNWGR QGGGICRPSC VFRWEFYPFY GAFANVTRVP APPRALIPRT EAISITRLKG GIIAIFVVPI VINLLVFIGL
301: IRAYTRIRKS YNGINEAQYD YGGQSKLRFD FRMILTATDD FSFENKIGQG GFGSVYKGKL PGGEEIAVKR LTRGSGQGEI EFRNEVLLLT RLQHRNLVKL
401: LGFCNEGDEE ILVYEFVPNS SLDHFIFDEE KRLLLTWDMR ARIIEGVARG LVYLHEDSQL RIIHRDLKAS NILLDAYMNP KVADFGMARL FNMDQTRAVT
501: RKVVGTFGYM APEYVRNRTF SVKTDVYSFG VVLLEMITGR SNKNYFEALG LPAYAWKCWV AGEAASIIDH VLSRSRSNEI MRFIHIGLLC VQENVSKRPT
601: MSLVIQWLGS ETIAIPLPTV AGFTNASYQA EHEAGTLSLN ELSITELSPR

Arabidopsis Description

CRK38cysteine-rich RLK (RECEPTOR-like protein kinase) 38 [Source:TAIR;Acc:AT4G04510]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.