CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62376	Canola	plasma membrane	96.18	53.58
Bra029470.1-P	Field mustard	plasma membrane	97.57	44.25
CDY21304	Canola	plasma membrane	42.71	42.27
CDY16663	Canola	plasma membrane	75.0	32.98
CDX97326	Canola	plasma membrane	68.06	30.06
CDY51854	Canola	plasma membrane	63.54	27.98
CDX97327	Canola	plasma membrane	63.19	27.87
CDY53875	Canola	plasma membrane	74.31	27.86
CDY37174	Canola	plasma membrane	62.85	27.68
CDX90868	Canola	plasma membrane	60.07	27.12
CDX90867	Canola	plasma membrane	59.38	26.84
CDX90866	Canola	plasma membrane	60.07	26.66
CDX90869	Canola	plasma membrane	56.25	24.85
CDY21307	Canola	plasma membrane	54.17	23.78
CDX90871	Canola	plasma membrane	53.82	23.63
CDY65897	Canola	plasma membrane	50.69	23.55
CDX90872	Canola	plasma membrane	51.04	22.58
CDX97323	Canola	cytosol	40.62	21.31
CDY33543	Canola	cytosol	40.62	21.31
CDX90870	Canola	cytosol	38.89	20.9
CDY53873	Canola	plasma membrane	46.18	20.88
CDY21309	Canola	plasma membrane	46.18	20.65
CDY16662	Canola	plasma membrane	46.53	20.46
CDY68796	Canola	plasma membrane	40.28	17.68
CDY16665	Canola	plasma membrane	39.58	17.57
CDY16664	Canola	plasma membrane	35.07	15.83
CDY53877	Canola	plasma membrane	34.72	15.7
CDX94557	Canola	plasma membrane	39.24	14.27
CDY26975	Canola	cytosol, mitochondrion, plastid	2.78	4.57
CDX94471	Canola	cytosol	1.39	1.13
CDY21305	Canola	cytosol	1.04	0.96
CDY51546	Canola	plasma membrane	0.0	0.0
CDX90809	Canola	mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:CDY16698	EnsemblPlantsGene:GSBRNA2T00094556001	Gene3D:3.30.430.20	InterPro:GNK2	InterPro:GNK2_sf	InterPro:IPR002902
InterPro:IPR038408	PANTHER:PTHR32099	PANTHER:PTHR32099:SF10	PFAM:PF01657	PFscan:PS51473	ProteinID:CDY16698
ProteinID:CDY16698.1	SEG:seg	SignalP:SignalP-noTM	UniParc:UPI0004EE24AC	UniProt:A0A078FW89	MapMan:35.1

Description

BnaA09g20760DBnaA09g20760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FW89]

Coordinates

chrLK032066:+:616349..617215

Molecular Weight (calculated)

32043.9 Da

IEP (calculated)

6.492

GRAVY (calculated)

-0.235

Length

288 amino acids

Sequence
(BLAST)

001: MGLNPVLIIF LSSSLLIVLQ NLDVANAVTC SGSFINGNSS YFQNRDNLFS TLASKVVANG GFYNASLGKS PNSVHALVLC KRGYERQECI SCVEKVTQEI
101: QTGCPNRMDS FKWDNDDGDH VNCLVRSSNH STFKNFQLVP AVIFPNALTI EPSKDMTLFR QQWEATVNRT IEDAAEAETS SILKYYSAVE AEFTEFPNVY
201: ILMQCTPDIT SRECKTCLEK CATYFTKQFW GRQGGEVSRP SCVFRWDLYA FHGAFDNVTR VPAPPGPQAQ ANGTFITDKK GKTTELKA

Best Arabidopsis Sequence Match ( AT4G04540.1 )
(BLAST)

001: MGKYSVLMIF IASSLLIVLQ NVEIVNAVGC TGSFFNGNSS YAQNRRDLFS TLPNKVVTNG GFYNSSLGKS PNIVHAVALC GRGYEQQACI RCVDSAIQGI
101: LTTTSCLNRV DSFTWDKDEE DNVSCLVSTS NHSTFGNLEL RPSVRYQSPN SIEPSKNMTL FEQEWNAMAN RTVESATEAE TSSVLKYYSA EKAEFTEFPN
201: VYMLMQCTPD ITSQDCKTCL GECVTLFKEQ VWGRQGGEVY RPSCFFRWDL YAFHGAFDNV TRVPAPPRPQ AQGNESSITK KKGRSIGYGG IIAIVVVLTF
301: INILVFIGYI KVYGRRKESY NKINVGSAEY SDSDGQFMLR FDLGMVLAAT DEFSSENTLG QGGFGTVYKG TLLNGQEVAV KRLTKGSGQG DIEFKNEVSL
401: LTRLQHRNLV KLLGFCNEGD EQILVYEFVP NSSLDHFIFD DEKRSLLTWE MRYRIIEGIA RGLLYLHEDS QLKIIHRDLK ASNILLDAEM NPKVADFGTA
501: RLFDSDETRA ETKRIAGTRG YMAPEYLNHG QISAKSDVYS FGVMLLEMIS GERNNSFEGE GLAAFAWKRW VEGKPEIIID PFLIEKPRNE IIKLIQIGLL
601: CVQENPTKRP TMSSVIIWLG SETNIIPLPK APAFTGSRSQ SEIGAMSMSD DVFTELSCR

Arabidopsis Description

CRK39Putative cysteine-rich receptor-like protein kinase 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYS7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.