CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

plastid 2
mitochondrion 3
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane, plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EES05123

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G20740.1	EES05123	AT1G27300.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0679900-01	Rice	mitochondrion, plasma membrane	79.91	80.65
Zm00001d026634_P002	Maize	mitochondrion	80.37	80.0
TraesCS2B01G596400.1	Wheat	mitochondrion, plasma membrane	68.04	69.3
TraesCS2A01G587000.1	Wheat	plasma membrane	68.04	69.3
HORVU2Hr1G118680.7	Barley	endoplasmic reticulum	51.14	62.92
GSMUA_Achr10P...	Banana	plasma membrane	54.79	62.5
GSMUA_Achr1P02970_001	Banana	plasma membrane	52.05	57.0
GSMUA_Achr5P10780_001	Banana	extracellular, plasma membrane	49.32	52.43
VIT_12s0059g00180.t01	Wine grape	golgi, mitochondrion, plasma membrane	50.68	52.36
KRH55976	Soybean	plasma membrane	47.49	49.29
PGSC0003DMT400047175	Potato	plasma membrane	49.77	49.1
KRH25560	Soybean	plasma membrane	46.58	48.57
Solyc07g054160.2.1	Tomato	plasma membrane	48.86	48.2
CDY05788	Canola	plasma membrane	46.12	47.2
VIT_00s0583g00020.t01	Wine grape	plasma membrane	44.75	46.45
CDY31941	Canola	plasma membrane	45.21	46.26
Bra036498.1-P	Field mustard	plasma membrane	45.21	46.26
AT2G20740.1	Thale cress	plasma membrane	42.47	42.08
PGSC0003DMT400057803	Potato	plasma membrane	39.27	39.81
Solyc02g078450.2.1	Tomato	plasma membrane	37.9	38.43
GSMUA_Achr11P...	Banana	plasma membrane	55.25	36.23
EER89022	Sorghum	extracellular, plasma membrane	30.14	26.29
EES13397	Sorghum	plasma membrane	29.22	23.36
KXG38876	Sorghum	plasma membrane	23.74	18.64

Protein Annotations

EnsemblPlants:EES13114	EnsemblPlantsGene:SORBI_3006G269700	EntrezGene:8076475	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR19282	PANTHER:PTHR19282:SF158	ProteinID:EES13114	ProteinID:EES13114.1	RefSeq:XP_002448786.1	TMHMM:TMhelix
unigene:Sbi.12455	UniParc:UPI0001A875FE	UniProt:C5YAL2	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr6:-:60211445..60214898

Molecular Weight (calculated)

24606.9 Da

IEP (calculated)

5.257

GRAVY (calculated)

0.215

Length

219 amino acids

Sequence
(BLAST)

001: MAGRMVRSCV QTALKAANSV VGLAGMAVIL YALWMLRAWY REVADHHLHQ RLPVPWFIYA FLGLGIFLCL LTCSGHIAAE TANGHCLSCY MIIVFVLIIL
101: EGTITMDVCL NSNWEEDFPP DPSGKFEDFK DFVKSNFEIC EWVGLSVVAA QVLSIILGMV LRTLGPERET DYDSDDDTIV PARLPLLRNQ AQHGLDYAEP
201: NTSRRSDSWK LRILDKVNN

Best Arabidopsis Sequence Match ( AT2G20740.1 )
(BLAST)

001: MVRIVRSCLQ SMLKLVNSLI GMVGIAMILY AVWLIRQWQE QMGNLPFADS DHPVPWFIYS FLGLGAILCV VTCAGHIAAE TVNGCCLYLY MGFIVLLTMV
101: EGGVVADIFL NRDWKKDFPE DPSGAFHQFS KFIESNFKIC KWIGLSIVCV QGLSVLIAML LKALGPHPHR HYDSDDEYNV STVALLQDAR QPPPYVVGEP
201: MYGAKPGAWT VRLMKGQTGE R

Arabidopsis Description

TOM2AH3Tetraspanin-19 [Source:UniProtKB/Swiss-Prot;Acc:Q940P5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.