CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

plastid 2
mitochondrion 2
extracellular 3
nucleus 1
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028780_P001	Maize	extracellular, plasma membrane	66.14	82.18
Os06t0731400-02	Rice	golgi, plasma membrane	68.13	70.66
TraesCS3D01G457500.3	Wheat	golgi, plasma membrane	66.53	67.89
TraesCS7B01G360600.1	Wheat	plasma membrane	66.14	66.94
TraesCS7B01G360400.1	Wheat	plasma membrane	66.14	66.94
TraesCS3B01G506800.1	Wheat	golgi, mitochondrion, plasma membrane, plastid	65.34	66.67
TraesCS7D01G447700.1	Wheat	plasma membrane	66.53	66.01
TraesCS3A01G463600.1	Wheat	extracellular, mitochondrion, plasma membrane, plastid	64.54	65.85
HORVU7Hr1G105880.1	Barley	plastid	65.74	55.0
GSMUA_Achr2P17910_001	Banana	plasma membrane	29.08	50.34
GSMUA_Achr7P06690_001	Banana	plasma membrane	27.89	43.21
KRH19680	Soybean	plasma membrane	38.25	39.18
KRH32282	Soybean	plasma membrane	37.05	38.11
VIT_07s0005g04950.t01	Wine grape	plasma membrane	38.65	35.4
PGSC0003DMT400048750	Potato	plasma membrane	36.26	35.14
Solyc09g063070.2.1	Tomato	plasma membrane	36.26	35.14
CDY31986	Canola	plasma membrane	36.26	34.08
AT2G20230.1	Thale cress	plasma membrane	36.65	34.07
CDY65849	Canola	plasma membrane	36.26	33.83
CDY35218	Canola	plasma membrane	36.65	33.7
CDY06872	Canola	plasma membrane	36.65	33.7
Bra011059.1-P	Field mustard	plasma membrane	36.26	33.33
EES13114	Sorghum	mitochondrion, plasma membrane	26.29	30.14
AT4G28770.2	Thale cress	plasma membrane	34.26	26.46
EES13397	Sorghum	plasma membrane	25.1	22.99
KXG38876	Sorghum	plasma membrane	24.3	21.86

Protein Annotations

EnsemblPlants:EER89022	EnsemblPlantsGene:SORBI_3010G280100	EntrezGene:8069251	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR19282	PANTHER:PTHR19282:SF227	ProteinID:EER89022	ProteinID:EER89022.1	RefSeq:XP_002437655.1	SEG:seg
TMHMM:TMhelix	unigene:Sbi.1021	UniParc:UPI0001A8993B	UniProt:C5Z2P0	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr10:+:61223540..61226724

Molecular Weight (calculated)

28070.3 Da

IEP (calculated)

7.188

GRAVY (calculated)

0.348

Length

251 amino acids

Sequence
(BLAST)

001: MVRRRSRESG RGRSLSLGWP ACCLGFLLKL LAFLQAFAAV SVLLYAAWMF SRWARHHQLH LSDLLSPDLW FSSLVMAAGL FYCLLLLAGY LAAEINTGCC
101: LCFYTIPAMA MMLLEAALAA HLALNEHWVQ DLPEDRTGEL HNLLSFIHNN LDLCKWAALA IFATQALSLL LAMILRAMLS ARIVDYDSDE DFVVIRRPLL
201: VTQAPAPYLP TTVDARGARP DLWSSTLRHK YGLNTSDYTY NTMDANAAQS Q

Best Arabidopsis Sequence Match ( AT2G20230.1 )
(BLAST)

001: MRRNCCHVSF ASTLKILNFV QAFIGVSIII YSIWMLHEYS RHLPVDPPPS ASSSSGTEIA TSVSEPLKNP IDFVASIILG SNGGDHGFNL RSLDLPAPWF
101: IYSFMAVGIL VCIVTFIGFI AAEAINGCCL CFYSILKTLL ILLEAALVAY IAIDRHWEKD LPYDPTGELS SLRAFIEENI DICKWVGIAV VAVQLLSLLL
201: AMVLRAMVST PKPELDEEED DENPRSRTWD PLLGPQGNQA PAGSSKIENW SSRIREKYGL NQSPPVNPKG

Arabidopsis Description

TOM2AH2Tetraspanin-18 [Source:UniProtKB/Swiss-Prot;Acc:Q93XY5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.