Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 8
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH19680 | Soybean | plasma membrane | 90.98 | 90.61 |
| VIT_07s0005g04950.t01 | Wine grape | plasma membrane | 59.02 | 52.55 |
| GSMUA_Achr7P06690_001 | Banana | plasma membrane | 32.79 | 49.38 |
| GSMUA_Achr2P17910_001 | Banana | plasma membrane | 27.87 | 46.9 |
| CDY06872 | Canola | plasma membrane | 52.46 | 46.89 |
| CDY31986 | Canola | plasma membrane | 51.23 | 46.82 |
| CDY65849 | Canola | plasma membrane | 51.23 | 46.47 |
| CDY35218 | Canola | plasma membrane | 51.64 | 46.15 |
| AT2G20230.1 | Thale cress | plasma membrane | 50.82 | 45.93 |
| Solyc09g063070.2.1 | Tomato | plasma membrane | 47.95 | 45.17 |
| Bra011059.1-P | Field mustard | plasma membrane | 50.41 | 45.05 |
| PGSC0003DMT400048750 | Potato | plasma membrane | 47.54 | 44.79 |
| AT4G28770.2 | Thale cress | plasma membrane | 52.46 | 39.38 |
| Os06t0731400-02 | Rice | golgi, plasma membrane | 37.7 | 38.02 |
| EER89022 | Sorghum | extracellular, plasma membrane | 38.11 | 37.05 |
| TraesCS3D01G457500.3 | Wheat | golgi, plasma membrane | 36.89 | 36.59 |
| TraesCS3B01G506800.1 | Wheat | golgi, mitochondrion, plasma membrane, plastid | 36.89 | 36.59 |
| TraesCS7B01G360600.1 | Wheat | plasma membrane | 36.48 | 35.89 |
| TraesCS7B01G360400.1 | Wheat | plasma membrane | 36.48 | 35.89 |
| KRH25560 | Soybean | plasma membrane | 30.74 | 35.71 |
| Zm00001d028780_P001 | Maize | extracellular, plasma membrane | 29.51 | 35.64 |
| TraesCS3A01G463600.1 | Wheat | extracellular, mitochondrion, plasma membrane, plastid | 35.66 | 35.37 |
| KRH55976 | Soybean | plasma membrane | 29.51 | 34.12 |
| TraesCS7D01G447700.1 | Wheat | plasma membrane | 34.84 | 33.6 |
| KRH57584 | Soybean | plasma membrane | 29.92 | 30.17 |
| KRH77234 | Soybean | golgi, plasma membrane, vacuole | 34.84 | 30.04 |
| KRH28260 | Soybean | golgi, plasma membrane, vacuole | 34.84 | 30.04 |
| HORVU7Hr1G105880.1 | Barley | plastid | 36.48 | 29.67 |
| KRH04302 | Soybean | endoplasmic reticulum | 33.61 | 29.6 |
Protein Annotations
| EMBL:ACUP02006110 | EnsemblPlants:KRH32282 | EnsemblPlantsGene:GLYMA_10G042400 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Tetraspanin | InterPro:Tetraspanin/Peripherin | PANTHER:PTHR19282 | PANTHER:PTHR19282:SF227 | PFAM:PF00335 | PRINTS:PR00259 |
| ProteinID:KRH32282 | ProteinID:KRH32282.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000233D3D9 | UniProt:K7LHE2 |
| MapMan:35.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:3778188..3783189
Molecular Weight (calculated)
27497.3 Da
IEP (calculated)
4.584
GRAVY (calculated)
0.296
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLNLCHVSL GFVLKFLNFL QCFVGLSILL YSLWMFNEWD HSVPPDPPLP PAFHFYLKLN SINLPAPWFI YNFMGFGILV LCISFLGCIA AEMINGCCLC
101: FYSILVVVLL LLEASLVGFI ALDSDWEKDI PFDPTGQLDE LRAFIEDNID TCTWVGIAVL VIQALSLLLA LILRATVSSR RADFDYEDGY DVRGRSWEPL
201: LNPQPGQPSG SSKGDNSGNH SDFWSVRMRE KYGLNHGDKS SYQP
101: FYSILVVVLL LLEASLVGFI ALDSDWEKDI PFDPTGQLDE LRAFIEDNID TCTWVGIAVL VIQALSLLLA LILRATVSSR RADFDYEDGY DVRGRSWEPL
201: LNPQPGQPSG SSKGDNSGNH SDFWSVRMRE KYGLNHGDKS SYQP
001: MRRNCCHVSF ASTLKILNFV QAFIGVSIII YSIWMLHEYS RHLPVDPPPS ASSSSGTEIA TSVSEPLKNP IDFVASIILG SNGGDHGFNL RSLDLPAPWF
101: IYSFMAVGIL VCIVTFIGFI AAEAINGCCL CFYSILKTLL ILLEAALVAY IAIDRHWEKD LPYDPTGELS SLRAFIEENI DICKWVGIAV VAVQLLSLLL
201: AMVLRAMVST PKPELDEEED DENPRSRTWD PLLGPQGNQA PAGSSKIENW SSRIREKYGL NQSPPVNPKG
101: IYSFMAVGIL VCIVTFIGFI AAEAINGCCL CFYSILKTLL ILLEAALVAY IAIDRHWEKD LPYDPTGELS SLRAFIEENI DICKWVGIAV VAVQLLSLLL
201: AMVLRAMVST PKPELDEEED DENPRSRTWD PLLGPQGNQA PAGSSKIENW SSRIREKYGL NQSPPVNPKG
Arabidopsis Description
TOM2AH2Tetraspanin-18 [Source:UniProtKB/Swiss-Prot;Acc:Q93XY5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.