Factsheet for TraesCS7B01G360400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	extracellular, mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G360600.1	Wheat	plasma membrane	100.0	100.0
TraesCS7D01G447700.1	Wheat	plasma membrane	90.73	88.93
TraesCS3B01G506800.1	Wheat	golgi, mitochondrion, plasma membrane, plastid	83.06	83.74
Os06t0731400-02	Rice	golgi, plasma membrane	71.77	73.55
HORVU7Hr1G105880.1	Barley	plastid	83.87	69.33
Zm00001d028780_P001	Maize	extracellular, plasma membrane	54.03	66.34
EER89022	Sorghum	extracellular, plasma membrane	66.94	66.14
GSMUA_Achr2P17910_001	Banana	plasma membrane	27.42	46.9
GSMUA_Achr7P06690_001	Banana	plasma membrane	29.03	44.44
KRH19680	Soybean	plasma membrane	36.69	37.14
Solyc09g063070.2.1	Tomato	plasma membrane	38.71	37.07
KRH32282	Soybean	plasma membrane	35.89	36.48
PGSC0003DMT400048750	Potato	plasma membrane	37.9	36.29
VIT_07s0005g04950.t01	Wine grape	plasma membrane	36.69	33.21
CDY31986	Canola	plasma membrane	35.08	32.58
AT2G20230.1	Thale cress	plasma membrane	35.08	32.22
CDY06872	Canola	plasma membrane	35.08	31.87
CDY65849	Canola	plasma membrane	34.27	31.6
Bra011059.1-P	Field mustard	plasma membrane	34.68	31.5
CDY35218	Canola	plasma membrane	34.27	31.14
TraesCS2B01G596400.1	Wheat	mitochondrion, plasma membrane	23.79	27.44
AT4G28770.2	Thale cress	plasma membrane	34.68	26.46
TraesCS1B01G148900.1	Wheat	golgi, plasma membrane, vacuole	23.39	20.35
TraesCS7B01G187200.1	Wheat	plasma membrane	21.77	20.07

Protein Annotations

EnsemblPlants:TraesCS7B01G360400.1	EnsemblPlantsGene:TraesCS7B01G360400	PANTHER:PTHR19282	PANTHER:PTHR19282:SF227	SEG:seg	TMHMM:TMhelix
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:622670263..622672532

Molecular Weight (calculated)

27001.6 Da

IEP (calculated)

6.489

GRAVY (calculated)

0.331

Length

248 amino acids

Sequence
(BLAST)

001: MARGSRSGRN GGGGGCASCC LGFLLKFLAF LQAFAAVSAV LYAASILSRW ARHHELHFDR LLPDLWFACA VMAAGLLYCA ILLAGYVAAE VNSGCCLCFY
101: TILAMAMMLL EAAVAGHLLL NEHWMQDLPY DRTRELENLV SFVNNNLDLC KWAALATVAT QAFSLFLAIT LRAMVSSTNA DFDSDEDFVV IRRPLLLAQG
201: APAYLPTTAD PRGAHPGLWS SSMRQKYGLN STSDYTYNTL DQNAVPPQ

Best Arabidopsis Sequence Match ( AT2G20230.1 )
(BLAST)

001: MRRNCCHVSF ASTLKILNFV QAFIGVSIII YSIWMLHEYS RHLPVDPPPS ASSSSGTEIA TSVSEPLKNP IDFVASIILG SNGGDHGFNL RSLDLPAPWF
101: IYSFMAVGIL VCIVTFIGFI AAEAINGCCL CFYSILKTLL ILLEAALVAY IAIDRHWEKD LPYDPTGELS SLRAFIEENI DICKWVGIAV VAVQLLSLLL
201: AMVLRAMVST PKPELDEEED DENPRSRTWD PLLGPQGNQA PAGSSKIENW SSRIREKYGL NQSPPVNPKG

Arabidopsis Description

TOM2AH2Tetraspanin-18 [Source:UniProtKB/Swiss-Prot;Acc:Q93XY5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.