Factsheet for HORVU7Hr1G105880.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
extracellular 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	extracellular, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
TargetP:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G360600.1	Wheat	plasma membrane	69.33	83.87
TraesCS7B01G360400.1	Wheat	plasma membrane	69.33	83.87
TraesCS3B01G506800.1	Wheat	golgi, mitochondrion, plasma membrane, plastid	67.0	81.71
TraesCS3A01G463600.1	Wheat	extracellular, mitochondrion, plasma membrane, plastid	66.33	80.89
TraesCS7D01G447700.1	Wheat	plasma membrane	67.67	80.24
TraesCS3D01G457500.3	Wheat	golgi, plasma membrane	65.0	79.27
Os06t0731400-02	Rice	golgi, plasma membrane	55.0	68.18
Zm00001d028780_P001	Maize	extracellular, plasma membrane	44.67	66.34
EER89022	Sorghum	extracellular, plasma membrane	55.0	65.74
GSMUA_Achr2P17910_001	Banana	plasma membrane	22.67	46.9
GSMUA_Achr7P06690_001	Banana	plasma membrane	24.33	45.06
KRH19680	Soybean	plasma membrane	30.67	37.55
Solyc09g063070.2.1	Tomato	plasma membrane	31.67	36.68
KRH32282	Soybean	plasma membrane	29.67	36.48
PGSC0003DMT400048750	Potato	plasma membrane	31.33	36.29
VIT_07s0005g04950.t01	Wine grape	plasma membrane	31.33	34.31
CDY31986	Canola	plasma membrane	30.33	34.08
CDY06872	Canola	plasma membrane	31.0	34.07
Bra011059.1-P	Field mustard	plasma membrane	31.0	34.07
CDY65849	Canola	plasma membrane	30.0	33.46
AT2G20230.1	Thale cress	plasma membrane	30.0	33.33
CDY35218	Canola	plasma membrane	30.33	33.33
HORVU2Hr1G118680.7	Barley	endoplasmic reticulum	18.33	30.9
AT4G28770.2	Thale cress	plasma membrane	29.33	27.08
HORVU1Hr1G034980.1	Barley	plasma membrane	20.33	21.4
HORVU7Hr1G070700.3	Barley	vacuole	18.67	20.82

Protein Annotations

EnsemblPlants:HORVU7Hr1G105880.1	EnsemblPlantsGene:HORVU7Hr1G105880	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR19282
PANTHER:PTHR19282:SF227	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B4606EF	UniProt:A0A287XP01	MapMan:35.1

Description

No Description!

Coordinates

chrchr7H:+:617943629..617946303

Molecular Weight (calculated)

32594.3 Da

IEP (calculated)

6.644

GRAVY (calculated)

0.240

Length

300 amino acids

Sequence
(BLAST)

001: PFADLPSLVH LQLGRPPFQS PVQIHLTFAS SSSSSSSLLF SQPESKSQIP NPATMARGSR SGSNGGGCAR CCLGFLLKFL AFLQAFAAVS AVLYAASILS
101: RWSRQHELRF DHLLPDLWFA CAVMAAGLLY CAILLAGYVA AEVNSGCCLC FYTILAMTMM LLEAAVAGQL LLNEHWIQDL PYDRTGELES LVSFVKNNLD
201: LCKWAAVATV ATQAFSLFLA MTLRAMVSPA NADYDSEEDF VVIRRPLLLA QGAPAYIPTT ADPRGAQPGL WSSSMRQKYG LNSTSDYTYN TLDQNAVRPQ

Best Arabidopsis Sequence Match ( AT2G20230.1 )
(BLAST)

001: MRRNCCHVSF ASTLKILNFV QAFIGVSIII YSIWMLHEYS RHLPVDPPPS ASSSSGTEIA TSVSEPLKNP IDFVASIILG SNGGDHGFNL RSLDLPAPWF
101: IYSFMAVGIL VCIVTFIGFI AAEAINGCCL CFYSILKTLL ILLEAALVAY IAIDRHWEKD LPYDPTGELS SLRAFIEENI DICKWVGIAV VAVQLLSLLL
201: AMVLRAMVST PKPELDEEED DENPRSRTWD PLLGPQGNQA PAGSSKIENW SSRIREKYGL NQSPPVNPKG

Arabidopsis Description

TOM2AH2Tetraspanin-18 [Source:UniProtKB/Swiss-Prot;Acc:Q93XY5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.