Factsheet for HORVU7Hr1G070700.3

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

vacuole: 19391183

msms PMID: 19391183 doi

T Schneider, M Schellenberg, S Meyer, F Keller, P Gehrig, K Riedel, Y Lee, L Eberl, E Martinoia

Institute of Plant Biology, University of Zurich, Zollikerstrasse 107, Zurich, Switzerland. Thomas.Schneider@botinst.uzh.ch

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G187200.1	Wheat	plasma membrane	96.65	96.65
TraesCS7D01G294800.2	Wheat	plasma membrane	96.28	96.28
TraesCS7A01G299900.1	Wheat	plasma membrane	96.28	96.28
EES13397	Sorghum	plasma membrane	82.16	80.66
Os08t0159100-01	Rice	plasma membrane	82.16	79.5
Zm00001d049526_P002	Maize	golgi, plasma membrane, vacuole	70.26	68.48
KRH77234	Soybean	golgi, plasma membrane, vacuole	53.16	50.53
KRH04302	Soybean	endoplasmic reticulum	51.67	50.18
Bra023264.1-P	Field mustard	plasma membrane	52.42	50.18
CDX93836	Canola	plasma membrane	52.42	50.18
GSMUA_Achr4P20930_001	Banana	golgi, plasma membrane, vacuole	52.42	49.82
KRH28260	Soybean	golgi, plasma membrane, vacuole	52.42	49.82
Bra010162.1-P	Field mustard	plasma membrane	51.67	49.82
CDY01278	Canola	plasma membrane	51.67	49.47
Solyc08g077220.2.1	Tomato	golgi, plasma membrane, vacuole	52.04	49.3
AT1G32400.3	Thale cress	plasma membrane	50.93	48.93
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	50.93	48.41
KRH57584	Soybean	plasma membrane	43.49	48.35
GSMUA_Achr1P00640_001	Banana	plasma membrane	48.33	47.27
GSMUA_Achr4P26390_001	Banana	golgi, plasma membrane, vacuole	49.44	46.83
VIT_02s0012g00560.t01	Wine grape	plasma membrane	48.7	46.79
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi	21.56	45.67
HORVU1Hr1G034980.1	Barley	plasma membrane	47.58	44.91
PGSC0003DMT400062233	Potato	plasma membrane	51.67	41.87
CDY48874	Canola	plasma membrane	51.67	40.41
CDY32286	Canola	plasma membrane	52.04	37.84
HORVU2Hr1G118680.7	Barley	endoplasmic reticulum	17.84	26.97
HORVU7Hr1G105880.1	Barley	plastid	20.82	18.67

Protein Annotations

EnsemblPlants:HORVU7Hr1G070700.3	EnsemblPlantsGene:HORVU7Hr1G070700	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:Tetraspanin/Peripherin
PANTHER:PTHR19282	PANTHER:PTHR19282:SF268	PFAM:PF00335	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002948B55
UniProt:M0X0W7	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:384438197..384441557

Molecular Weight (calculated)

29798.3 Da

IEP (calculated)

5.946

GRAVY (calculated)

0.353

Length

269 amino acids

Sequence
(BLAST)

001: MACRGFFECV LKLLNLVLMA VGLAMAGYGA YLLVFWLQLL PPSPPAPPPS GDLVRLGRPM LLLIDVSISV GTSQKLISAW FIFAFIGVGV ILFITSIFGC
101: AGASTGSGCC LSTYSFLIIL FILVELAAGC FIFFDHGWKD VIPVDKTGNF DTIYSFLKEN WRTAKWVALG AVVFEALLFT VALIVQSGNQ DDYDSDDEYI
201: GPRSGVRQPL VNKQTVTDPR VPNLDYRPIR NDAWSQRMRD KYGVDSFDPN RFQQATISPA EQRNRCTIL

Best Arabidopsis Sequence Match ( AT1G32400.3 )
(BLAST)

001: MACRGCLECL LKLLNFLLAV AGLGMIGYGI YLFVEYKRVT DNSVTFDLTN GDQSYVSFGR PILMAVSLSS NIFDNLPKAW FIYLFIGIGV ALFVISCCGC
101: VGTCSRSVCC LSCYSLLLIL LILVELGFAA FIFFDNSWRD ELPSDRTGNF DTIYNFLREN WKIVRWVALG AVVFEALLFL LALMVRAANT PAEYDSDDEY
201: LAPRQQIRQP FINRQAAPVT GVPVAPTLDQ RPSRSDPWSA RMREKYGLDT SEFTYNPSES HRFQQMPAQP NEEKGRCTIM

Arabidopsis Description

TOM2ATobamovirus multiplication protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q9C5W7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.