Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 8
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G32400.3 | Thale cress | plasma membrane | 90.68 | 90.36 |
| Bra023264.1-P | Field mustard | plasma membrane | 87.1 | 86.48 |
| CDY48874 | Canola | plasma membrane | 99.64 | 80.81 |
| CDY32286 | Canola | plasma membrane | 98.57 | 74.32 |
| KRH04302 | Soybean | endoplasmic reticulum | 68.82 | 69.31 |
| KRH57584 | Soybean | plasma membrane | 59.14 | 68.18 |
| KRH77234 | Soybean | golgi, plasma membrane, vacuole | 67.38 | 66.43 |
| Solyc08g077220.2.1 | Tomato | golgi, plasma membrane, vacuole | 67.03 | 65.85 |
| KRH28260 | Soybean | golgi, plasma membrane, vacuole | 66.31 | 65.37 |
| VIT_02s0012g00560.t01 | Wine grape | plasma membrane | 63.8 | 63.57 |
| GSMUA_Achr4P20930_001 | Banana | golgi, plasma membrane, vacuole | 56.99 | 56.18 |
| PGSC0003DMT400062233 | Potato | plasma membrane | 66.67 | 56.02 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 25.45 | 55.91 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane, vacuole | 55.56 | 54.77 |
| TraesCS1D01G133700.1 | Wheat | plasma membrane | 55.91 | 54.74 |
| TraesCS1B01G148900.1 | Wheat | golgi, plasma membrane, vacuole | 55.91 | 54.74 |
| KXG38876 | Sorghum | plasma membrane | 54.48 | 54.48 |
| TraesCS1A01G137700.2 | Wheat | plasma membrane | 55.56 | 54.39 |
| Zm00001d030014_P011 | Maize | plasma membrane | 54.12 | 54.12 |
| Os08t0282000-01 | Rice | plasma membrane | 54.84 | 53.87 |
| HORVU1Hr1G034980.1 | Barley | plasma membrane | 54.84 | 53.68 |
| GSMUA_Achr4P26390_001 | Banana | golgi, plasma membrane, vacuole | 54.48 | 53.52 |
| TraesCS7A01G299900.1 | Wheat | plasma membrane | 50.18 | 52.04 |
| HORVU7Hr1G070700.3 | Barley | vacuole | 49.82 | 51.67 |
| TraesCS7B01G187200.1 | Wheat | plasma membrane | 49.82 | 51.67 |
| TraesCS7D01G294800.2 | Wheat | plasma membrane | 49.82 | 51.67 |
| GSMUA_Achr1P00640_001 | Banana | plasma membrane | 50.9 | 51.64 |
| Os08t0159100-01 | Rice | plasma membrane | 50.18 | 50.36 |
| EES13397 | Sorghum | plasma membrane | 49.1 | 50.0 |
| Zm00001d047059_P004 | Maize | golgi, plasma membrane, vacuole | 54.12 | 46.75 |
| Zm00001d049526_P002 | Maize | golgi, plasma membrane, vacuole | 42.65 | 43.12 |
| Bra036498.1-P | Field mustard | plasma membrane | 23.3 | 30.37 |
| Bra011059.1-P | Field mustard | plasma membrane | 27.24 | 27.84 |
Protein Annotations
| EnsemblPlants:Bra010162.1 | EnsemblPlants:Bra010162.1-P | EnsemblPlantsGene:Bra010162 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Tetraspanin/Peripherin | PANTHER:PTHR19282 | PANTHER:PTHR19282:SF268 | PFAM:PF00335 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000253F7D4 | UniProt:M4D113 | MapMan:26.10.2.2 | : | : | : |
Description
AT1G32400 (E=8e-107) TOM2A | TOM2A (TOBAMOVIRUS MULTIPLICATION 2A); protein binding
Coordinates
chrA06:-:20291845..20293233
Molecular Weight (calculated)
31482.1 Da
IEP (calculated)
5.092
GRAVY (calculated)
0.130
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MACRGCLECL LKLLNFLLAV AGLGMIGYGI YLFVEYQRAT DNNSLNFTRD DQSHVSFGRP MLMSLALSSN VFDNLPKAWF IYLFIGIGVA LFVISCCGCV
101: GTCSRNVCCL SCYSLLLILL ILAELGAAAF IFFDNSWRDE IPSDRTGNFD TIYNFLRENW NIVRWVALGA VVFEALLFLL ALMVRAANTP AEYDSDDEFI
201: TPPRQIRQPF INRQPAPVTG VPVAPTLDQR PSRSDPWSAR MREKYGLDTS EFTYNPSESH RFQQMPTQPN EEKGRCTIM
101: GTCSRNVCCL SCYSLLLILL ILAELGAAAF IFFDNSWRDE IPSDRTGNFD TIYNFLRENW NIVRWVALGA VVFEALLFLL ALMVRAANTP AEYDSDDEFI
201: TPPRQIRQPF INRQPAPVTG VPVAPTLDQR PSRSDPWSAR MREKYGLDTS EFTYNPSESH RFQQMPTQPN EEKGRCTIM
001: MACRGCLECL LKLLNFLLAV AGLGMIGYGI YLFVEYKRVT DNSVTFDLTN GDQSYVSFGR PILMAVSLSS NIFDNLPKAW FIYLFIGIGV ALFVISCCGC
101: VGTCSRSVCC LSCYSLLLIL LILVELGFAA FIFFDNSWRD ELPSDRTGNF DTIYNFLREN WKIVRWVALG AVVFEALLFL LALMVRAANT PAEYDSDDEY
201: LAPRQQIRQP FINRQAAPVT GVPVAPTLDQ RPSRSDPWSA RMREKYGLDT SEFTYNPSES HRFQQMPAQP NEEKGRCTIM
101: VGTCSRSVCC LSCYSLLLIL LILVELGFAA FIFFDNSWRD ELPSDRTGNF DTIYNFLREN WKIVRWVALG AVVFEALLFL LALMVRAANT PAEYDSDDEY
201: LAPRQQIRQP FINRQAAPVT GVPVAPTLDQ RPSRSDPWSA RMREKYGLDT SEFTYNPSES HRFQQMPAQP NEEKGRCTIM
Arabidopsis Description
TOM2ATobamovirus multiplication protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q9C5W7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.