Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 7
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400062233 | Potato | plasma membrane | 97.89 | 83.73 |
| KRH04302 | Soybean | endoplasmic reticulum | 68.66 | 70.4 |
| KRH57584 | Soybean | plasma membrane | 59.86 | 70.25 |
| KRH77234 | Soybean | golgi, plasma membrane, vacuole | 69.01 | 69.26 |
| AT1G32400.3 | Thale cress | plasma membrane | 67.96 | 68.93 |
| KRH28260 | Soybean | golgi, plasma membrane, vacuole | 67.61 | 67.84 |
| Bra010162.1-P | Field mustard | plasma membrane | 65.85 | 67.03 |
| VIT_02s0012g00560.t01 | Wine grape | plasma membrane | 65.14 | 66.07 |
| Bra023264.1-P | Field mustard | plasma membrane | 63.73 | 64.41 |
| CDX93836 | Canola | plasma membrane | 63.73 | 64.41 |
| CDY01278 | Canola | plasma membrane | 63.03 | 63.7 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane, vacuole | 61.62 | 61.84 |
| GSMUA_Achr4P20930_001 | Banana | golgi, plasma membrane, vacuole | 59.51 | 59.72 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 25.35 | 56.69 |
| Os08t0282000-01 | Rice | plasma membrane | 56.69 | 56.69 |
| GSMUA_Achr4P26390_001 | Banana | golgi, plasma membrane, vacuole | 56.69 | 56.69 |
| TraesCS1D01G133700.1 | Wheat | plasma membrane | 55.99 | 55.79 |
| GSMUA_Achr1P00640_001 | Banana | plasma membrane | 53.87 | 55.64 |
| HORVU1Hr1G034980.1 | Barley | plasma membrane | 55.63 | 55.44 |
| TraesCS1A01G137700.2 | Wheat | plasma membrane | 55.28 | 55.09 |
| TraesCS1B01G148900.1 | Wheat | golgi, plasma membrane, vacuole | 54.93 | 54.74 |
| CDY48874 | Canola | plasma membrane | 65.85 | 54.36 |
| Zm00001d030014_P011 | Maize | plasma membrane | 52.82 | 53.76 |
| KXG38876 | Sorghum | plasma membrane | 52.46 | 53.41 |
| EES13397 | Sorghum | plasma membrane | 51.41 | 53.28 |
| HORVU7Hr1G070700.3 | Barley | vacuole | 49.3 | 52.04 |
| TraesCS7A01G299900.1 | Wheat | plasma membrane | 49.3 | 52.04 |
| TraesCS7D01G294800.2 | Wheat | plasma membrane | 48.94 | 51.67 |
| TraesCS7B01G187200.1 | Wheat | plasma membrane | 48.94 | 51.67 |
| Os08t0159100-01 | Rice | plasma membrane | 50.35 | 51.44 |
| CDY32286 | Canola | plasma membrane | 66.2 | 50.81 |
| Zm00001d047059_P004 | Maize | golgi, plasma membrane, vacuole | 51.76 | 45.51 |
| Zm00001d049526_P002 | Maize | golgi, plasma membrane, vacuole | 44.01 | 45.29 |
| Solyc07g054160.2.1 | Tomato | plasma membrane | 24.65 | 31.53 |
| Solyc09g063070.2.1 | Tomato | plasma membrane | 28.52 | 31.27 |
| Solyc02g078450.2.1 | Tomato | plasma membrane | 18.31 | 24.07 |
Protein Annotations
| MapMan:26.10.2.2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005794 | GO:GO:0008150 | GO:GO:0009506 |
| GO:GO:0009705 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0043621 | GO:GO:0046786 |
| UniProt:K4CN82 | PFAM:PF00335 | PANTHER:PTHR19282 | PANTHER:PTHR19282:SF268 | EnsemblPlantsGene:Solyc08g077220.2 | EnsemblPlants:Solyc08g077220.2.1 |
| TMHMM:TMhelix | InterPro:Tetraspanin/Peripherin | UniParc:UPI000276C2A2 | SEG:seg | : | : |
Description
Tobamovirus multiplication protein 2A [Source:Projected from Arabidopsis thaliana (AT1G32400) UniProtKB/Swiss-Prot;Acc:Q9C5W7]
Coordinates
chr8:-:61129865..61136381
Molecular Weight (calculated)
31854.6 Da
IEP (calculated)
5.139
GRAVY (calculated)
0.072
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MACKGFWECL LKLLNFLLTL VGLTMVGYGI YLFVEYKNHS HSGDDYPVAP PMSGDMIEFG RPMLMAVSLA ENIFDKLPKP WFIYLFIGIG AVLVVVSCCG
101: CIGAATRNGC CLSCYSMLIF LLILVELGAA GFIFFDKSWK DEIPRDKTGN FETIYDFLDD HWKIIKWVAL GAVIFEALIF LLALVVRAAN RPADYDSDDE
201: YIGGPRQQIR QPLINNRPPA NPATGVPVTA TLDNRPSRND AWSTRMREKY GLDTSEFTYN PSESNRYPPT AAQPQEERKG CTIM
101: CIGAATRNGC CLSCYSMLIF LLILVELGAA GFIFFDKSWK DEIPRDKTGN FETIYDFLDD HWKIIKWVAL GAVIFEALIF LLALVVRAAN RPADYDSDDE
201: YIGGPRQQIR QPLINNRPPA NPATGVPVTA TLDNRPSRND AWSTRMREKY GLDTSEFTYN PSESNRYPPT AAQPQEERKG CTIM
001: MACRGCLECL LKLLNFLLAV AGLGMIGYGI YLFVEYKRVT DNSVTFDLTN GDQSYVSFGR PILMAVSLSS NIFDNLPKAW FIYLFIGIGV ALFVISCCGC
101: VGTCSRSVCC LSCYSLLLIL LILVELGFAA FIFFDNSWRD ELPSDRTGNF DTIYNFLREN WKIVRWVALG AVVFEALLFL LALMVRAANT PAEYDSDDEY
201: LAPRQQIRQP FINRQAAPVT GVPVAPTLDQ RPSRSDPWSA RMREKYGLDT SEFTYNPSES HRFQQMPAQP NEEKGRCTIM
101: VGTCSRSVCC LSCYSLLLIL LILVELGFAA FIFFDNSWRD ELPSDRTGNF DTIYNFLREN WKIVRWVALG AVVFEALLFL LALMVRAANT PAEYDSDDEY
201: LAPRQQIRQP FINRQAAPVT GVPVAPTLDQ RPSRSDPWSA RMREKYGLDT SEFTYNPSES HRFQQMPAQP NEEKGRCTIM
Arabidopsis Description
TOM2ATobamovirus multiplication protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q9C5W7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.