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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_AchrUn_... Banana golgi, plasma membrane, vacuole 83.45 83.75
GSMUA_Achr4P20930_001 Banana golgi, plasma membrane, vacuole 76.76 77.03
GSMUA_Achr1P00640_001 Banana plasma membrane 73.94 76.36
Zm00001d030014_P011 Maize plasma membrane 66.9 68.1
Os08t0282000-01 Rice plasma membrane 67.61 67.61
KXG38876 Sorghum plasma membrane 66.2 67.38
TraesCS1B01G148900.1 Wheat golgi, plasma membrane, vacuole 66.2 65.96
TraesCS1A01G137700.2 Wheat plasma membrane 65.85 65.61
TraesCS1D01G133700.1 Wheat plasma membrane 65.85 65.61
HORVU1Hr1G034980.1 Barley plasma membrane 65.14 64.91
GSMUA_Achr11P... Banana endoplasmic reticulum, golgi 28.52 63.78
Zm00001d047059_P004 Maize golgi, plasma membrane, vacuole 66.2 58.2
KRH04302 Soybean endoplasmic reticulum 56.69 58.12
KRH57584 Soybean plasma membrane 49.3 57.85
KRH77234 Soybean golgi, plasma membrane, vacuole 56.69 56.89
Solyc08g077220.2.1 Tomato golgi, plasma membrane, vacuole 56.69 56.69
KRH28260 Soybean golgi, plasma membrane, vacuole 55.99 56.18
AT1G32400.3 Thale cress plasma membrane 54.93 55.71
Bra010162.1-P Field mustard plasma membrane 53.52 54.48
VIT_02s0012g00560.t01 Wine grape plasma membrane 53.17 53.93
CDX93836 Canola plasma membrane 52.11 52.67
Bra023264.1-P Field mustard plasma membrane 52.11 52.67
CDY01278 Canola plasma membrane 51.06 51.6
EES13397 Sorghum plasma membrane 48.24 50.0
TraesCS7A01G299900.1 Wheat plasma membrane 47.18 49.81
TraesCS7B01G187200.1 Wheat plasma membrane 46.83 49.44
TraesCS7D01G294800.2 Wheat plasma membrane 46.83 49.44
HORVU7Hr1G070700.3 Barley vacuole 46.83 49.44
PGSC0003DMT400062233 Potato plasma membrane 56.34 48.19
Os08t0159100-01 Rice plasma membrane 46.83 47.84
CDY48874 Canola plasma membrane 53.52 44.19
Zm00001d049526_P002 Maize golgi, plasma membrane, vacuole 41.2 42.39
CDY32286 Canola plasma membrane 53.87 41.35
GSMUA_Achr2P17910_001 Banana plasma membrane 18.31 35.86
GSMUA_Achr10P... Banana plasma membrane 18.66 27.6
GSMUA_Achr1P02970_001 Banana plasma membrane 17.61 25.0
GSMUA_Achr7P06690_001 Banana plasma membrane 13.38 23.46
GSMUA_Achr5P10780_001 Banana extracellular, plasma membrane 16.2 22.33
GSMUA_Achr11P... Banana plasma membrane 21.13 17.96
Protein Annotations
EnsemblPlants:GSMUA_Achr4P26390_001EnsemblPlants:GSMUA_Achr4T26390_001EnsemblPlantsGene:GSMUA_Achr4G26390_001GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:Tetraspanin/PeripherinPANTHER:PTHR19282PANTHER:PTHR19282:SF268PFAM:PF00335SEG:segTMHMM:TMhelix
UniParc:UPI000296DA5CUniProt:M0SSA1MapMan:26.10.2.2:::
Description
tetraspanin family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G26390_001]
Coordinates
chr4:+:25720235..25723877
Molecular Weight (calculated)
31554.3 Da
IEP (calculated)
4.937
GRAVY (calculated)
0.313
Length
284 amino acids
Sequence
(BLAST)
001: MACKGFWECL LKLLNFILTL AGLAMVGYGV YLLVEWNKVA SGSDGEDPAS PTSSDSEFLK LGRPILVAVS LSSSFLDYLP KAWFIYLFIG IGVVLFVISC
101: FGCIGAVTRN GCCLSCYAFL VILLVLAELA AAAFIFFDHS WKDLVPDDKT RNFDIIYNFL EDNWKIAKWV ALGVVILEAL VFMLALIVRA VNRPIEYDSD
201: DDVCIAPRSS IRQPLMNRQG APATGVPVLG TLDHRPSRND AWSQRMREKY GLDTSEFTYN PSDPSRYQQA TVPPAEERGH CTIL
Best Arabidopsis Sequence Match ( AT1G32400.3 )
(BLAST)
001: MACRGCLECL LKLLNFLLAV AGLGMIGYGI YLFVEYKRVT DNSVTFDLTN GDQSYVSFGR PILMAVSLSS NIFDNLPKAW FIYLFIGIGV ALFVISCCGC
101: VGTCSRSVCC LSCYSLLLIL LILVELGFAA FIFFDNSWRD ELPSDRTGNF DTIYNFLREN WKIVRWVALG AVVFEALLFL LALMVRAANT PAEYDSDDEY
201: LAPRQQIRQP FINRQAAPVT GVPVAPTLDQ RPSRSDPWSA RMREKYGLDT SEFTYNPSES HRFQQMPAQP NEEKGRCTIM
Arabidopsis Description
TOM2ATobamovirus multiplication protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q9C5W7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.