Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010162.1-P | Field mustard | plasma membrane | 80.81 | 99.64 |
| AT1G32400.3 | Thale cress | plasma membrane | 73.84 | 90.71 |
| CDX93836 | Canola | plasma membrane | 70.64 | 86.48 |
| CDY01278 | Canola | plasma membrane | 69.77 | 85.41 |
| CDY32286 | Canola | plasma membrane | 87.79 | 81.62 |
| KRH04302 | Soybean | endoplasmic reticulum | 55.81 | 69.31 |
| KRH57584 | Soybean | plasma membrane | 47.97 | 68.18 |
| KRH77234 | Soybean | golgi, plasma membrane, vacuole | 54.65 | 66.43 |
| Solyc08g077220.2.1 | Tomato | golgi, plasma membrane, vacuole | 54.36 | 65.85 |
| KRH28260 | Soybean | golgi, plasma membrane, vacuole | 53.78 | 65.37 |
| VIT_02s0012g00560.t01 | Wine grape | plasma membrane | 51.74 | 63.57 |
| GSMUA_Achr4P20930_001 | Banana | golgi, plasma membrane, vacuole | 46.22 | 56.18 |
| PGSC0003DMT400062233 | Potato | plasma membrane | 54.07 | 56.02 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 20.64 | 55.91 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane, vacuole | 45.06 | 54.77 |
| TraesCS1B01G148900.1 | Wheat | golgi, plasma membrane, vacuole | 45.35 | 54.74 |
| TraesCS1D01G133700.1 | Wheat | plasma membrane | 45.35 | 54.74 |
| KXG38876 | Sorghum | plasma membrane | 44.19 | 54.48 |
| TraesCS1A01G137700.2 | Wheat | plasma membrane | 45.06 | 54.39 |
| Zm00001d030014_P011 | Maize | plasma membrane | 43.9 | 54.12 |
| Os08t0282000-01 | Rice | plasma membrane | 44.48 | 53.87 |
| HORVU1Hr1G034980.1 | Barley | plasma membrane | 44.48 | 53.68 |
| GSMUA_Achr4P26390_001 | Banana | golgi, plasma membrane, vacuole | 44.19 | 53.52 |
| TraesCS7A01G299900.1 | Wheat | plasma membrane | 40.7 | 52.04 |
| TraesCS7B01G187200.1 | Wheat | plasma membrane | 40.41 | 51.67 |
| HORVU7Hr1G070700.3 | Barley | vacuole | 40.41 | 51.67 |
| TraesCS7D01G294800.2 | Wheat | plasma membrane | 40.41 | 51.67 |
| GSMUA_Achr1P00640_001 | Banana | plasma membrane | 41.28 | 51.64 |
| Os08t0159100-01 | Rice | plasma membrane | 40.7 | 50.36 |
| EES13397 | Sorghum | plasma membrane | 39.83 | 50.0 |
| Zm00001d047059_P004 | Maize | golgi, plasma membrane, vacuole | 43.9 | 46.75 |
| Zm00001d049526_P002 | Maize | golgi, plasma membrane, vacuole | 34.59 | 43.12 |
| CDY31941 | Canola | plasma membrane | 18.9 | 30.37 |
| CDY31986 | Canola | plasma membrane | 23.26 | 29.96 |
| CDY05788 | Canola | plasma membrane | 18.6 | 29.91 |
| CDY65849 | Canola | plasma membrane | 22.67 | 29.0 |
| CDY35218 | Canola | plasma membrane | 22.38 | 28.21 |
| CDY06872 | Canola | plasma membrane | 22.38 | 28.21 |
Protein Annotations
| EnsemblPlants:CDY48874 | EnsemblPlantsGene:GSBRNA2T00091934001 | GO:A0A078IHJ4 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Tetraspanin/Peripherin | ncoils:Coil | PANTHER:PTHR19282 | PANTHER:PTHR19282:SF268 | PFAM:PF00335 | ProteinID:CDY48874 |
| ProteinID:CDY48874.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE646F | UniProt:A0A078IHJ4 | MapMan:26.10.2.2 |
Description
BnaA05g35820DBnaA05g35820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHJ4]
Coordinates
chrLK032798:+:122983..125114
Molecular Weight (calculated)
39302.7 Da
IEP (calculated)
8.970
GRAVY (calculated)
-0.073
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MKYSKNTKQK KIPFHSLRFF FTFLSTTKIK IKNYLFRPLL EHSPERKKKR AESSIHKGAE SLKNKMACRG CLECLLKLLN FLLAVAGLGM IGYGIYLFVE
101: YQRATDNNSL NFTRDDQSYV SFGRPMLMSL ALSSNVFDNL PKAWFIYLFI GIGVALFVIS CCGCVGTCSR NVCCLSCYSL LLILLILAEL GAAAFIFFDN
201: SWRDEIPSDR TGNFDTIYNF LRENWNIVRW VALGAVVFEA LLFLLALMVR AANTPAEYDS DDEFITPPRQ IRQPFINRQP APVTGVPVAP TLDQRPSRSD
301: PWSARMREKY GLDTSEFTYN PSESHRFQQM PTQPNEEKGR CTIM
101: YQRATDNNSL NFTRDDQSYV SFGRPMLMSL ALSSNVFDNL PKAWFIYLFI GIGVALFVIS CCGCVGTCSR NVCCLSCYSL LLILLILAEL GAAAFIFFDN
201: SWRDEIPSDR TGNFDTIYNF LRENWNIVRW VALGAVVFEA LLFLLALMVR AANTPAEYDS DDEFITPPRQ IRQPFINRQP APVTGVPVAP TLDQRPSRSD
301: PWSARMREKY GLDTSEFTYN PSESHRFQQM PTQPNEEKGR CTIM
001: MACRGCLECL LKLLNFLLAV AGLGMIGYGI YLFVEYKRVT DNSVTFDLTN GDQSYVSFGR PILMAVSLSS NIFDNLPKAW FIYLFIGIGV ALFVISCCGC
101: VGTCSRSVCC LSCYSLLLIL LILVELGFAA FIFFDNSWRD ELPSDRTGNF DTIYNFLREN WKIVRWVALG AVVFEALLFL LALMVRAANT PAEYDSDDEY
201: LAPRQQIRQP FINRQAAPVT GVPVAPTLDQ RPSRSDPWSA RMREKYGLDT SEFTYNPSES HRFQQMPAQP NEEKGRCTIM
101: VGTCSRSVCC LSCYSLLLIL LILVELGFAA FIFFDNSWRD ELPSDRTGNF DTIYNFLREN WKIVRWVALG AVVFEALLFL LALMVRAANT PAEYDSDDEY
201: LAPRQQIRQP FINRQAAPVT GVPVAPTLDQ RPSRSDPWSA RMREKYGLDT SEFTYNPSES HRFQQMPAQP NEEKGRCTIM
Arabidopsis Description
TOM2ATobamovirus multiplication protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q9C5W7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.