Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 9
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane, vacuole | 79.27 | 77.03 |
| GSMUA_Achr4P26390_001 | Banana | golgi, plasma membrane, vacuole | 76.36 | 73.94 |
| GSMUA_Achr4P20930_001 | Banana | golgi, plasma membrane, vacuole | 71.64 | 69.61 |
| Os08t0282000-01 | Rice | plasma membrane | 64.0 | 61.97 |
| Zm00001d030014_P011 | Maize | plasma membrane | 61.82 | 60.93 |
| KXG38876 | Sorghum | plasma membrane | 61.09 | 60.22 |
| TraesCS1B01G148900.1 | Wheat | golgi, plasma membrane, vacuole | 61.45 | 59.3 |
| TraesCS1D01G133700.1 | Wheat | plasma membrane | 61.09 | 58.95 |
| HORVU1Hr1G034980.1 | Barley | plasma membrane | 61.09 | 58.95 |
| TraesCS1A01G137700.2 | Wheat | plasma membrane | 61.09 | 58.95 |
| KRH04302 | Soybean | endoplasmic reticulum | 55.64 | 55.23 |
| Solyc08g077220.2.1 | Tomato | golgi, plasma membrane, vacuole | 55.64 | 53.87 |
| KRH57584 | Soybean | plasma membrane | 46.91 | 53.31 |
| KRH77234 | Soybean | golgi, plasma membrane, vacuole | 52.73 | 51.24 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi | 23.64 | 51.18 |
| Zm00001d047059_P004 | Maize | golgi, plasma membrane, vacuole | 60.0 | 51.08 |
| AT1G32400.3 | Thale cress | plasma membrane | 52.0 | 51.07 |
| VIT_02s0012g00560.t01 | Wine grape | plasma membrane | 52.0 | 51.07 |
| Bra010162.1-P | Field mustard | plasma membrane | 51.64 | 50.9 |
| KRH28260 | Soybean | golgi, plasma membrane, vacuole | 52.36 | 50.88 |
| Bra023264.1-P | Field mustard | plasma membrane | 50.55 | 49.47 |
| CDX93836 | Canola | plasma membrane | 50.55 | 49.47 |
| CDY01278 | Canola | plasma membrane | 50.18 | 49.11 |
| TraesCS7A01G299900.1 | Wheat | plasma membrane | 47.64 | 48.7 |
| TraesCS7D01G294800.2 | Wheat | plasma membrane | 47.27 | 48.33 |
| HORVU7Hr1G070700.3 | Barley | vacuole | 47.27 | 48.33 |
| TraesCS7B01G187200.1 | Wheat | plasma membrane | 46.91 | 47.96 |
| EES13397 | Sorghum | plasma membrane | 47.27 | 47.45 |
| Os08t0159100-01 | Rice | plasma membrane | 46.55 | 46.04 |
| PGSC0003DMT400062233 | Potato | plasma membrane | 55.27 | 45.78 |
| CDY48874 | Canola | plasma membrane | 51.64 | 41.28 |
| CDY32286 | Canola | plasma membrane | 52.0 | 38.65 |
| Zm00001d049526_P002 | Maize | golgi, plasma membrane, vacuole | 38.55 | 38.41 |
| GSMUA_Achr2P17910_001 | Banana | plasma membrane | 17.45 | 33.1 |
| GSMUA_Achr10P... | Banana | plasma membrane | 19.27 | 27.6 |
| GSMUA_Achr7P06690_001 | Banana | plasma membrane | 14.55 | 24.69 |
| GSMUA_Achr1P02970_001 | Banana | plasma membrane | 17.09 | 23.5 |
| GSMUA_Achr5P10780_001 | Banana | extracellular, plasma membrane | 17.45 | 23.3 |
| GSMUA_Achr11P... | Banana | plasma membrane | 20.0 | 16.47 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P00640_001 | EnsemblPlants:GSMUA_Achr1T00640_001 | EnsemblPlantsGene:GSMUA_Achr1G00640_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Tetraspanin/Peripherin | PANTHER:PTHR19282 | PANTHER:PTHR19282:SF268 | PFAM:PF00335 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000294F438 | UniProt:M0RVX2 | MapMan:26.10.2.2 | : | : | : |
Description
tetraspanin family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G00640_001]
Coordinates
chr1:+:504655..507852
Molecular Weight (calculated)
30934.6 Da
IEP (calculated)
6.261
GRAVY (calculated)
0.212
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MACKGFWEYL LKLLNFLLTL TGLAMVGYGV YLLMEYNKVS SGGDGDDQVA PTSNDPKFWM IGRPMLVGVP LSSSFLDHLP KAWFIYLFIG VGAILFVISC
101: IGCIGAVTRN GCCLSCYSFL VILLILVELA AAAFIFFNHS WKDLIPDDKT GNFDTIYEFL ENNWKITKWV ALGAVILEAL VFVLSLMVRA AANRAVEYDS
201: DDEYIRQPLM NRQGVPPVLG TLDHRPSRND AWSQRMREKY GLNTFEFAYK QSNPSRYQQA TASQAEERGS RCIIL
101: IGCIGAVTRN GCCLSCYSFL VILLILVELA AAAFIFFNHS WKDLIPDDKT GNFDTIYEFL ENNWKITKWV ALGAVILEAL VFVLSLMVRA AANRAVEYDS
201: DDEYIRQPLM NRQGVPPVLG TLDHRPSRND AWSQRMREKY GLNTFEFAYK QSNPSRYQQA TASQAEERGS RCIIL
001: MACRGCLECL LKLLNFLLAV AGLGMIGYGI YLFVEYKRVT DNSVTFDLTN GDQSYVSFGR PILMAVSLSS NIFDNLPKAW FIYLFIGIGV ALFVISCCGC
101: VGTCSRSVCC LSCYSLLLIL LILVELGFAA FIFFDNSWRD ELPSDRTGNF DTIYNFLREN WKIVRWVALG AVVFEALLFL LALMVRAANT PAEYDSDDEY
201: LAPRQQIRQP FINRQAAPVT GVPVAPTLDQ RPSRSDPWSA RMREKYGLDT SEFTYNPSES HRFQQMPAQP NEEKGRCTIM
101: VGTCSRSVCC LSCYSLLLIL LILVELGFAA FIFFDNSWRD ELPSDRTGNF DTIYNFLREN WKIVRWVALG AVVFEALLFL LALMVRAANT PAEYDSDDEY
201: LAPRQQIRQP FINRQAAPVT GVPVAPTLDQ RPSRSDPWSA RMREKYGLDT SEFTYNPSES HRFQQMPAQP NEEKGRCTIM
Arabidopsis Description
TOM2ATobamovirus multiplication protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q9C5W7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.