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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane, plastid, extracellular

Predictor Summary:
  • mitochondrion 2
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, mitochondrion, plasma membrane, plastid
Any Predictor:extracellular, mitochondrion, plasma membrane, plastid
iPSORT:mitochondrion
MultiLoc:extracellular
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G457500.3 Wheat golgi, plasma membrane 94.72 94.72
TraesCS3B01G506800.1 Wheat golgi, mitochondrion, plasma membrane, plastid 93.9 93.9
Os06t0731400-02 Rice golgi, plasma membrane 71.54 72.73
Zm00001d028780_P001 Maize extracellular, plasma membrane 54.88 66.83
HORVU7Hr1G105880.1 Barley plastid 80.89 66.33
EER89022 Sorghum extracellular, plasma membrane 65.85 64.54
GSMUA_Achr2P17910_001 Banana plasma membrane 28.05 47.59
GSMUA_Achr7P06690_001 Banana plasma membrane 30.08 45.68
PGSC0003DMT400048750 Potato plasma membrane 39.43 37.45
Solyc09g063070.2.1 Tomato plasma membrane 39.02 37.07
KRH19680 Soybean plasma membrane 36.59 36.73
KRH32282 Soybean plasma membrane 35.37 35.66
VIT_07s0005g04950.t01 Wine grape plasma membrane 37.8 33.94
CDY31986 Canola plasma membrane 36.59 33.71
CDY35218 Canola plasma membrane 36.59 32.97
CDY06872 Canola plasma membrane 36.59 32.97
Bra011059.1-P Field mustard plasma membrane 36.59 32.97
AT2G20230.1 Thale cress plasma membrane 36.18 32.96
CDY65849 Canola plasma membrane 35.77 32.71
TraesCS2A01G587000.1 Wheat plasma membrane 26.02 29.77
AT4G28770.2 Thale cress plasma membrane 35.37 26.77
TraesCS7A01G299900.1 Wheat plasma membrane 24.39 22.3
TraesCS1A01G137700.2 Wheat plasma membrane 24.39 21.05
Protein Annotations
EnsemblPlants:TraesCS3A01G463600.1EnsemblPlantsGene:TraesCS3A01G463600PANTHER:PTHR19282PANTHER:PTHR19282:SF227SEG:segTMHMM:TMhelix
MapMan:35.1:::::
Description
No Description!
Coordinates
chr3A:+:697782709..697785467
Molecular Weight (calculated)
26608.4 Da
IEP (calculated)
7.162
GRAVY (calculated)
0.347
Length
246 amino acids
Sequence
(BLAST)
001: MARGGRSEKS GGGCGRCCLG FLLKLLAFLQ AFAALSAVLY AASILSRWAR HHELHIHHLL PDLWFACAVM AAGLLYCAIL LAGYVAAEVS SGCCLCFYTG
101: LAMVMMLLEA AVAGRILLNE HWIQDLPHDR TGELENLVSF VNANLDLCKW AALATVATQA LSLFLAMVLR AMVSPTSGDY DSDEDFVVIR RPLLIARGAP
201: SYLPTTADPR GGHPNLWSSS MRQKYGLNSS GDYTYNTLGQ NAVPPQ
Best Arabidopsis Sequence Match ( AT4G28770.2 )
(BLAST)
001: MSSSEYILSV KTTFFCFVRN HQRLFLRRSL LRSLISISRI VIEKMRHNCC HVSFASILKI LNFLQAFIGI SIIIYSIWML DQYNHHVPVD PPPSQPPAAS
101: SPDSSYSFSN SIIEINSVSD SLKNPIDFVS GIVLGSGGGD SGFNLRSLDL PAPWFIYCFM AIGILVCIVT IIGFIAAEAI NGCCLCFYSI LKTLLIIIEA
201: ALVGFIVIDR HWEKDLPYDP TGELNSLRAF IEENIDICKW VGIVVVAIQL LSLLLALVLR AMVSPRQSEL DDEDDFENPM SRARDNLLGP QANQTSSGSS
301: NIDNWRSRIR EKYGLINSQS HTPSA
Arabidopsis Description
Tetraspanin family protein [Source:UniProtKB/TrEMBL;Acc:F4JM26]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.