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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane, golgi, plastid

Predictor Summary:
  • mitochondrion 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion, plasma membrane, plastid
Any Predictor:golgi, mitochondrion, plasma membrane, plastid
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G457500.3 Wheat golgi, plasma membrane 94.31 94.31
TraesCS3A01G463600.1 Wheat extracellular, mitochondrion, plasma membrane, plastid 93.9 93.9
TraesCS7B01G360600.1 Wheat plasma membrane 83.74 83.06
TraesCS7B01G360400.1 Wheat plasma membrane 83.74 83.06
Os06t0731400-02 Rice golgi, plasma membrane 72.36 73.55
HORVU7Hr1G105880.1 Barley plastid 81.71 67.0
Zm00001d028780_P001 Maize extracellular, plasma membrane 54.47 66.34
EER89022 Sorghum extracellular, plasma membrane 66.67 65.34
GSMUA_Achr2P17910_001 Banana plasma membrane 29.27 49.66
GSMUA_Achr7P06690_001 Banana plasma membrane 30.89 46.91
KRH19680 Soybean plasma membrane 37.8 37.96
Solyc09g063070.2.1 Tomato plasma membrane 39.02 37.07
KRH32282 Soybean plasma membrane 36.59 36.89
PGSC0003DMT400048750 Potato plasma membrane 38.62 36.68
VIT_07s0005g04950.t01 Wine grape plasma membrane 37.8 33.94
CDY31986 Canola plasma membrane 36.59 33.71
CDY35218 Canola plasma membrane 36.59 32.97
CDY06872 Canola plasma membrane 36.59 32.97
Bra011059.1-P Field mustard plasma membrane 36.59 32.97
CDY65849 Canola plasma membrane 35.77 32.71
AT2G20230.1 Thale cress plasma membrane 35.77 32.59
TraesCS2B01G596400.1 Wheat mitochondrion, plasma membrane 25.61 29.3
AT4G28770.2 Thale cress plasma membrane 35.77 27.08
TraesCS7B01G187200.1 Wheat plasma membrane 24.39 22.3
TraesCS1B01G148900.1 Wheat golgi, plasma membrane, vacuole 24.39 21.05
Protein Annotations
EnsemblPlants:TraesCS3B01G506800.1EnsemblPlantsGene:TraesCS3B01G506800PANTHER:PTHR19282PANTHER:PTHR19282:SF227SEG:segTMHMM:TMhelix
MapMan:35.1:::::
Description
No Description!
Coordinates
chr3B:+:750354624..750358038
Molecular Weight (calculated)
26850.5 Da
IEP (calculated)
6.842
GRAVY (calculated)
0.283
Length
246 amino acids
Sequence
(BLAST)
001: MARGGRSEKG GGGCGRCCLG FLLKFLAFLQ AFAALSAVLY AASILSRWAR HHELHIHHLL PDLWFACAVM AAGLLYCAIL LAGYVAAETS SGCCLCFYTG
101: LAMVMMLLEA AVAGRILLNE HWIQDLPYDR TGELENLVSF VNNNLDLCKW AALATFATQA LSLFLAMVLR AMVSPTSSDY DSDEDFVVIR RPLLIAQGAP
201: SYLPTTADPR GGHPNLWSSS MRQKYGLNSS GDYTYNTLDQ NAVRPQ
Best Arabidopsis Sequence Match ( AT4G28770.2 )
(BLAST)
001: MSSSEYILSV KTTFFCFVRN HQRLFLRRSL LRSLISISRI VIEKMRHNCC HVSFASILKI LNFLQAFIGI SIIIYSIWML DQYNHHVPVD PPPSQPPAAS
101: SPDSSYSFSN SIIEINSVSD SLKNPIDFVS GIVLGSGGGD SGFNLRSLDL PAPWFIYCFM AIGILVCIVT IIGFIAAEAI NGCCLCFYSI LKTLLIIIEA
201: ALVGFIVIDR HWEKDLPYDP TGELNSLRAF IEENIDICKW VGIVVVAIQL LSLLLALVLR AMVSPRQSEL DDEDDFENPM SRARDNLLGP QANQTSSGSS
301: NIDNWRSRIR EKYGLINSQS HTPSA
Arabidopsis Description
Tetraspanin family protein [Source:UniProtKB/TrEMBL;Acc:F4JM26]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.