Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 3
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06872 | Canola | plasma membrane | 72.0 | 85.71 |
| Bra011059.1-P | Field mustard | plasma membrane | 65.54 | 78.02 |
| CDY35218 | Canola | plasma membrane | 64.0 | 76.19 |
| AT2G20230.1 | Thale cress | plasma membrane | 59.38 | 71.48 |
| KRH32282 | Soybean | plasma membrane | 39.38 | 52.46 |
| VIT_07s0005g04950.t01 | Wine grape | plasma membrane | 43.69 | 51.82 |
| KRH19680 | Soybean | plasma membrane | 37.85 | 50.2 |
| GSMUA_Achr7P06690_001 | Banana | plasma membrane | 24.62 | 49.38 |
| GSMUA_Achr2P17910_001 | Banana | plasma membrane | 20.0 | 44.83 |
| PGSC0003DMT400048750 | Potato | plasma membrane | 35.38 | 44.4 |
| Solyc09g063070.2.1 | Tomato | plasma membrane | 35.08 | 44.02 |
| Zm00001d028780_P001 | Maize | extracellular, plasma membrane | 23.69 | 38.12 |
| TraesCS3D01G457500.3 | Wheat | golgi, plasma membrane | 27.69 | 36.59 |
| TraesCS3B01G506800.1 | Wheat | golgi, mitochondrion, plasma membrane, plastid | 27.08 | 35.77 |
| TraesCS3A01G463600.1 | Wheat | extracellular, mitochondrion, plasma membrane, plastid | 26.77 | 35.37 |
| Os06t0731400-02 | Rice | golgi, plasma membrane | 26.15 | 35.12 |
| TraesCS7B01G360400.1 | Wheat | plasma membrane | 26.46 | 34.68 |
| TraesCS7B01G360600.1 | Wheat | plasma membrane | 26.46 | 34.68 |
| EER89022 | Sorghum | extracellular, plasma membrane | 26.46 | 34.26 |
| TraesCS7D01G447700.1 | Wheat | plasma membrane | 25.54 | 32.81 |
| AT2G20740.1 | Thale cress | plasma membrane | 21.54 | 31.67 |
| HORVU7Hr1G105880.1 | Barley | plastid | 27.08 | 29.33 |
| AT1G32400.3 | Thale cress | plasma membrane | 23.69 | 27.5 |
Protein Annotations
| MapMan:35.1 | EntrezGene:828998 | ProteinID:AEE85540.1 | ProteinID:AEE85541.1 | EMBL:AK227413 | ArrayExpress:AT4G28770 |
| EnsemblPlantsGene:AT4G28770 | RefSeq:AT4G28770 | TAIR:AT4G28770 | RefSeq:AT4G28770-TAIR-G | EnsemblPlants:AT4G28770.2 | TAIR:AT4G28770.2 |
| EMBL:AY085919 | Unigene:At.2528 | EMBL:BT005982 | ProteinID:CAA22975.1 | ProteinID:CAB81465.1 | UniProt:F4JM26 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 |
| GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_001190864.1 | RefSeq:NP_194606.1 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR19282 | PANTHER:PTHR19282:SF227 | TMHMM:TMhelix |
| UniParc:UPI0001E92FBF | SEG:seg | : | : | : | : |
Description
Tetraspanin family protein [Source:UniProtKB/TrEMBL;Acc:F4JM26]
Coordinates
chr4:-:14211855..14213969
Molecular Weight (calculated)
36237.0 Da
IEP (calculated)
6.152
GRAVY (calculated)
0.295
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSEYILSV KTTFFCFVRN HQRLFLRRSL LRSLISISRI VIEKMRHNCC HVSFASILKI LNFLQAFIGI SIIIYSIWML DQYNHHVPVD PPPSQPPAAS
101: SPDSSYSFSN SIIEINSVSD SLKNPIDFVS GIVLGSGGGD SGFNLRSLDL PAPWFIYCFM AIGILVCIVT IIGFIAAEAI NGCCLCFYSI LKTLLIIIEA
201: ALVGFIVIDR HWEKDLPYDP TGELNSLRAF IEENIDICKW VGIVVVAIQL LSLLLALVLR AMVSPRQSEL DDEDDFENPM SRARDNLLGP QANQTSSGSS
301: NIDNWRSRIR EKYGLINSQS HTPSA
101: SPDSSYSFSN SIIEINSVSD SLKNPIDFVS GIVLGSGGGD SGFNLRSLDL PAPWFIYCFM AIGILVCIVT IIGFIAAEAI NGCCLCFYSI LKTLLIIIEA
201: ALVGFIVIDR HWEKDLPYDP TGELNSLRAF IEENIDICKW VGIVVVAIQL LSLLLALVLR AMVSPRQSEL DDEDDFENPM SRARDNLLGP QANQTSSGSS
301: NIDNWRSRIR EKYGLINSQS HTPSA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.