Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G360600.1 | Wheat | plasma membrane | 88.93 | 90.73 |
| TraesCS7B01G360400.1 | Wheat | plasma membrane | 88.93 | 90.73 |
| TraesCS3D01G457500.3 | Wheat | golgi, plasma membrane | 80.63 | 82.93 |
| Os06t0731400-02 | Rice | golgi, plasma membrane | 69.57 | 72.73 |
| HORVU7Hr1G105880.1 | Barley | plastid | 80.24 | 67.67 |
| EER89022 | Sorghum | extracellular, plasma membrane | 66.01 | 66.53 |
| Zm00001d028780_P001 | Maize | extracellular, plasma membrane | 52.57 | 65.84 |
| GSMUA_Achr2P17910_001 | Banana | plasma membrane | 26.09 | 45.52 |
| GSMUA_Achr7P06690_001 | Banana | plasma membrane | 28.06 | 43.83 |
| KRH19680 | Soybean | plasma membrane | 34.78 | 35.92 |
| Solyc09g063070.2.1 | Tomato | plasma membrane | 36.76 | 35.91 |
| PGSC0003DMT400048750 | Potato | plasma membrane | 36.36 | 35.52 |
| KRH32282 | Soybean | plasma membrane | 33.6 | 34.84 |
| VIT_07s0005g04950.t01 | Wine grape | plasma membrane | 35.57 | 32.85 |
| CDY31986 | Canola | plasma membrane | 34.39 | 32.58 |
| AT2G20230.1 | Thale cress | plasma membrane | 33.99 | 31.85 |
| CDY65849 | Canola | plasma membrane | 33.6 | 31.6 |
| CDY35218 | Canola | plasma membrane | 33.6 | 31.14 |
| CDY06872 | Canola | plasma membrane | 33.6 | 31.14 |
| Bra011059.1-P | Field mustard | plasma membrane | 33.6 | 31.14 |
| AT4G28770.2 | Thale cress | plasma membrane | 32.81 | 25.54 |
| TraesCS1D01G133700.1 | Wheat | plasma membrane | 24.9 | 22.11 |
| TraesCS7D01G294800.2 | Wheat | plasma membrane | 21.74 | 20.45 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G447700.1 | EnsemblPlantsGene:TraesCS7D01G447700 | PANTHER:PTHR19282 | PANTHER:PTHR19282:SF227 | SEG:seg | TMHMM:TMhelix |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:568026439..568029412
Molecular Weight (calculated)
27599.4 Da
IEP (calculated)
6.377
GRAVY (calculated)
0.343
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MARGSRPGRN GGGGGGCARC FLGFLLKFLA FLQVFAAVSA AVSAVLYAAS ILSRWARHHE LHFDHLLPDL WFACVVMAAG LLYCAILLAG YVAAEVNSGC
101: CLCFYTILAM AMMLLEAAVA GHLLLNEHWM QDLPYDRTRE LENLVSFVNN NLDLCKWAAL ATVATQVFSL FLAITLRAMV SPTNEDCDSD EDFVVIRRPL
201: LLAQGAPAYL PTTADPRGAH PGLWSSSMRQ KYGLNSTSDY TYNTLDQNAV PPQ
101: CLCFYTILAM AMMLLEAAVA GHLLLNEHWM QDLPYDRTRE LENLVSFVNN NLDLCKWAAL ATVATQVFSL FLAITLRAMV SPTNEDCDSD EDFVVIRRPL
201: LLAQGAPAYL PTTADPRGAH PGLWSSSMRQ KYGLNSTSDY TYNTLDQNAV PPQ
001: MSSSEYILSV KTTFFCFVRN HQRLFLRRSL LRSLISISRI VIEKMRHNCC HVSFASILKI LNFLQAFIGI SIIIYSIWML DQYNHHVPVD PPPSQPPAAS
101: SPDSSYSFSN SIIEINSVSD SLKNPIDFVS GIVLGSGGGD SGFNLRSLDL PAPWFIYCFM AIGILVCIVT IIGFIAAEAI NGCCLCFYSI LKTLLIIIEA
201: ALVGFIVIDR HWEKDLPYDP TGELNSLRAF IEENIDICKW VGIVVVAIQL LSLLLALVLR AMVSPRQSEL DDEDDFENPM SRARDNLLGP QANQTSSGSS
301: NIDNWRSRIR EKYGLINSQS HTPSA
101: SPDSSYSFSN SIIEINSVSD SLKNPIDFVS GIVLGSGGGD SGFNLRSLDL PAPWFIYCFM AIGILVCIVT IIGFIAAEAI NGCCLCFYSI LKTLLIIIEA
201: ALVGFIVIDR HWEKDLPYDP TGELNSLRAF IEENIDICKW VGIVVVAIQL LSLLLALVLR AMVSPRQSEL DDEDDFENPM SRARDNLLGP QANQTSSGSS
301: NIDNWRSRIR EKYGLINSQS HTPSA
Arabidopsis Description
Tetraspanin family protein [Source:UniProtKB/TrEMBL;Acc:F4JM26]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.