Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- golgi 3
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G10030.1 | EES02290 | AT3G16310.1 | 21798944 |
| AT1G10030.1 | EES19830 | AT3G16310.1 | 21798944 |
| AT1G10030.1 | EER96942 | AT4G26455.1 | 21798944 |
| AT1G10030.1 | EES14314 | AT4G26455.1 | 21798944 |
| AT1G10030.1 | OQU81760 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d037522_P001 | Maize | extracellular, golgi | 93.75 | 95.07 |
| OQU79719 | Sorghum | extracellular, golgi | 93.06 | 94.37 |
| TraesCS2A01G357200.1 | Wheat | extracellular, golgi | 84.72 | 85.92 |
| TraesCS2D01G356000.1 | Wheat | extracellular, golgi, plasma membrane | 84.03 | 85.21 |
| Os12t0633200-01 | Rice | extracellular, golgi | 80.56 | 83.45 |
| TraesCS2B01G376400.1 | Wheat | golgi | 80.56 | 81.69 |
| GSMUA_Achr6P30120_001 | Banana | extracellular | 70.83 | 78.46 |
| VIT_18s0001g08330.t01 | Wine grape | extracellular | 70.83 | 77.86 |
| AT1G10030.1 | Thale cress | extracellular, golgi | 68.75 | 76.74 |
| KRH62124 | Soybean | extracellular, golgi | 68.75 | 76.74 |
| GSMUA_Achr7P08060_001 | Banana | extracellular, golgi, plasma membrane | 68.75 | 76.15 |
| Bra018466.1-P | Field mustard | extracellular | 67.36 | 75.19 |
| KRH52827 | Soybean | extracellular | 67.36 | 75.19 |
| CDY57928 | Canola | extracellular, golgi, vacuole | 67.36 | 75.19 |
| PGSC0003DMT400012718 | Potato | extracellular, golgi | 66.67 | 74.42 |
| CDY63742 | Canola | extracellular, golgi | 66.67 | 74.42 |
| CDY31053 | Canola | extracellular | 66.67 | 74.42 |
| CDY20664 | Canola | extracellular | 65.97 | 73.08 |
| Solyc04g077150.2.1 | Tomato | extracellular, golgi | 65.28 | 72.87 |
| HORVU1Hr1G028210.2 | Barley | endoplasmic reticulum, extracellular, mitochondrion, plastid | 52.08 | 69.44 |
| HORVU6Hr1G068400.2 | Barley | endoplasmic reticulum, extracellular | 65.97 | 67.38 |
| HORVU4Hr1G011970.1 | Barley | endoplasmic reticulum, extracellular, mitochondrion, plastid | 63.19 | 66.91 |
| HORVU2Hr1G086900.2 | Barley | golgi, plasma membrane | 75.0 | 65.45 |
| Bra019965.1-P | Field mustard | golgi, plasma membrane | 66.67 | 58.54 |
| HORVU6Hr1G056080.4 | Barley | endoplasmic reticulum, vacuole | 17.36 | 56.82 |
Protein Annotations
| MapMan:35.1 | EntrezGene:8071216 | UniProt:C5Z102 | EnsemblPlants:EES19099 | ProteinID:EES19099 | ProteinID:EES19099.1 |
| InterPro:Erg28 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0006629 | GO:GO:0006696 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0030674 | PFAM:PF03694 | PANTHER:PTHR15451 | EnsemblPlantsGene:SORBI_3009G057500 | TMHMM:TMhelix | UniParc:UPI0001A88D6C |
| RefSeq:XP_002440669.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:5869786..5872740
Molecular Weight (calculated)
16319.0 Da
IEP (calculated)
8.875
GRAVY (calculated)
0.481
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEGRKKGV PALGWWLMLV GSLRLASVWF GFFDIWALRV AVFSQTEMTD VHGRTFGVWT LLTCTLCFLC ALNLENRPLY LATFLSFIYA LGHFLTEYLI
101: YHTMAAANLS TVGFFAGTSI IWMLLQWNHH VNQNHRGAQA VKQS
101: YHTMAAANLS TVGFFAGTSI IWMLLQWNHH VNQNHRGAQA VKQS
001: MKALGYWLMV VGSLRLASVW FGFFNIWALR LAVFSQTTMS EVHGRTFGVW TLLTCTLCFL CAFNLENKPL YLATFLSFIY ALGHFLTEYL FYQTMTIANL
101: STVGFFAGTS IVWMLLEWNS LEQPHSKLS
101: STVGFFAGTS IVWMLLEWNS LEQPHSKLS
Arabidopsis Description
ERG28Ergosterol biosynthetic protein 28 [Source:UniProtKB/Swiss-Prot;Acc:O80594]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.