Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH00099 | Soybean | golgi | 95.58 | 95.89 |
| KRG88789 | Soybean | cytosol, golgi, mitochondrion, plasma membrane | 83.28 | 84.08 |
| KRH75771 | Soybean | cytosol, golgi, mitochondrion, peroxisome | 82.33 | 83.12 |
| VIT_08s0007g01510.t01 | Wine grape | cytosol, golgi, mitochondrion, plasma membrane | 82.02 | 82.28 |
| PGSC0003DMT400028621 | Potato | cytosol, golgi, plasma membrane | 76.66 | 78.64 |
| CDX76176 | Canola | mitochondrion | 74.76 | 78.48 |
| CDY13168 | Canola | mitochondrion, plasma membrane | 74.76 | 78.48 |
| Bra014848.1-P | Field mustard | mitochondrion | 74.13 | 77.81 |
| CDX91395 | Canola | mitochondrion, plasma membrane | 74.45 | 77.38 |
| AT3G54020.1 | Thale cress | mitochondrion, plasma membrane | 73.82 | 76.72 |
| Solyc10g084990.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 75.39 | 76.6 |
| PGSC0003DMT400049398 | Potato | plasma membrane | 68.77 | 76.49 |
| CDY18417 | Canola | plasma membrane | 73.19 | 76.07 |
| Bra017148.1-P | Field mustard | plasma membrane | 73.19 | 76.07 |
| CDX74925 | Canola | mitochondrion, plasma membrane | 73.19 | 75.82 |
| CDX93341 | Canola | plasma membrane | 72.87 | 75.74 |
| AT2G37940.1 | Thale cress | mitochondrion, plasma membrane | 72.87 | 75.74 |
| Bra000029.1-P | Field mustard | plasma membrane | 70.66 | 75.68 |
| Bra005148.1-P | Field mustard | mitochondrion, plasma membrane | 71.92 | 75.25 |
| CDY14501 | Canola | mitochondrion, plasma membrane | 73.19 | 75.08 |
| CDY69104 | Canola | mitochondrion, plasma membrane | 73.19 | 75.08 |
| Zm00001d046198_P001 | Maize | endoplasmic reticulum, plasma membrane | 11.36 | 75.0 |
| CDY07761 | Canola | mitochondrion, plasma membrane | 72.87 | 75.0 |
| Solyc10g086690.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 68.14 | 73.72 |
| Solyc09g011740.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 72.87 | 73.1 |
| PGSC0003DMT400052472 | Potato | plasma membrane | 72.24 | 72.47 |
| GSMUA_Achr6P23620_001 | Banana | golgi | 70.66 | 71.57 |
| GSMUA_Achr3P17660_001 | Banana | cytosol, golgi, mitochondrion, plasma membrane | 69.4 | 70.06 |
| HORVU1Hr1G073060.1 | Barley | plasma membrane | 70.35 | 69.91 |
| HORVU1Hr1G073040.1 | Barley | plasma membrane | 70.35 | 69.91 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, mitochondrion, plasma membrane | 69.09 | 69.75 |
| GSMUA_AchrUn_... | Banana | cytosol, golgi, mitochondrion, plasma membrane | 69.09 | 69.3 |
| Os05t0452900-02 | Rice | cytosol, golgi, mitochondrion, plasma membrane | 70.66 | 68.92 |
| TraesCS1D01G279500.1 | Wheat | plasma membrane | 69.72 | 68.63 |
| TraesCS1B01G289300.1 | Wheat | plasma membrane | 69.72 | 68.63 |
| TraesCS1A01G280400.1 | Wheat | plasma membrane | 69.4 | 68.54 |
| Os05t0287800-01 | Rice | mitochondrion | 67.51 | 68.37 |
| EES19630 | Sorghum | cytosol, golgi, plasma membrane | 68.77 | 68.34 |
| Zm00001d038343_P001 | Maize | plasma membrane | 68.77 | 68.34 |
| KXG23698 | Sorghum | mitochondrion | 67.19 | 68.05 |
| EES01758 | Sorghum | mitochondrion | 69.4 | 67.9 |
| Zm00001d012380_P002 | Maize | plasma membrane | 69.4 | 67.9 |
| Zm00001d030613_P003 | Maize | mitochondrion, plasma membrane | 66.56 | 67.41 |
| Zm00001d041608_P001 | Maize | mitochondrion, plasma membrane | 66.56 | 67.41 |
| Os01t0850100-01 | Rice | cytosol, golgi, mitochondrion, plasma membrane | 69.09 | 67.18 |
| TraesCS3B01G396900.1 | Wheat | golgi | 69.09 | 67.18 |
| TraesCS3A01G365000.1 | Wheat | plasma membrane | 68.77 | 66.87 |
| TraesCS3D01G358200.1 | Wheat | golgi | 68.77 | 66.87 |
| Zm00001d042851_P003 | Maize | golgi, plasma membrane, plastid | 69.72 | 62.25 |
| CDY18431 | Canola | plasma membrane | 43.85 | 59.91 |
| HORVU3Hr1G085630.8 | Barley | plastid | 62.15 | 55.97 |
Protein Annotations
| EntrezGene:100801213 | MapMan:5.4.13.1 | EMBL:ACUP02004343 | EnsemblPlantsGene:GLYMA_07G142000 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005802 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | GO:GO:0030148 | GO:GO:0045140 | UniProt:I1KK80 | EnsemblPlants:KRH49241 |
| ProteinID:KRH49241 | ProteinID:KRH49241.1 | PFAM:PF14360 | PANTHER:PTHR21290 | PANTHER:PTHR21290:SF46 | InterPro:Sphingomyelin_synth-like_dom |
| TMHMM:TMhelix | UniParc:UPI0002338D88 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:16871126..16876362
Molecular Weight (calculated)
36150.9 Da
IEP (calculated)
9.356
GRAVY (calculated)
0.044
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFYIGREAS KLWKRFYAET TTELNLLAEN WKYLLAGIAF QYIHGLAARG VHYLHRPGPT LQDLGFILLP ELGQEKAYIS ETLFTFIFLS FVLWTFHPFI
101: FKSKKIYTAL IWCRVLAFLV ASQALRIVTF YATQLPGPNY HCREGSKLAT LPRPDSVFEV LLINFPQDAI YGCGDLIFSS HMIFTLVFVN TYHRYGTRRC
201: IKQLGWTLAV CQSLLIIASR KHYTVDIVVA WYTVNLVVFF VEKKLKELPD RTNAAAALLL PLSTKDNKDG RTKEENHKLL NGNSGVDPAD WRQRTQANGK
301: ILEDGHAHHV DTAMNGA
101: FKSKKIYTAL IWCRVLAFLV ASQALRIVTF YATQLPGPNY HCREGSKLAT LPRPDSVFEV LLINFPQDAI YGCGDLIFSS HMIFTLVFVN TYHRYGTRRC
201: IKQLGWTLAV CQSLLIIASR KHYTVDIVVA WYTVNLVVFF VEKKLKELPD RTNAAAALLL PLSTKDNKDG RTKEENHKLL NGNSGVDPAD WRQRTQANGK
301: ILEDGHAHHV DTAMNGA
001: MTLYIRREAS KLWRRFCSEI TTEIGLLAEN WKYLLAGLLC QYIHGLAARG VHYIHRPGPT LQDSGFFVLP ELGQDKGFIS ETVFTCVFLS FFLWTFHPFI
101: VKSKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSELAR LPRPHNVLEV LLLNFPRGVI YGCGDLIFSS HMIFTLVFVR TYQKYGSKRF
201: IKLLGWVIAI LQSLLIIASR KHYTVDVVVA WYTVNLVVFF LDKKLPELPD RTTALLPVIS KDRTKEESHK LLNGNGVDPA DRRPRAQVNG KDSNGGHTDN
301: ATNGT
101: VKSKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSELAR LPRPHNVLEV LLLNFPRGVI YGCGDLIFSS HMIFTLVFVR TYQKYGSKRF
201: IKLLGWVIAI LQSLLIIASR KHYTVDVVVA WYTVNLVVFF LDKKLPELPD RTTALLPVIS KDRTKEESHK LLNGNGVDPA DRRPRAQVNG KDSNGGHTDN
301: ATNGT
Arabidopsis Description
IPCS1Phosphatidylinositol:ceramide inositolphosphotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M325]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.