Skip to main content
crop-pal logo
Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • golgi 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc10g086690.1.1 Tomato cytosol, golgi, mitochondrion, plasma membrane 96.14 93.52
PGSC0003DMT400028621 Potato cytosol, golgi, plasma membrane 85.61 78.96
PGSC0003DMT400052472 Potato plasma membrane 83.51 75.32
VIT_08s0007g01510.t01 Wine grape cytosol, golgi, mitochondrion, plasma membrane 81.4 73.42
KRG88789 Soybean cytosol, golgi, mitochondrion, plasma membrane 80.35 72.93
Zm00001d046198_P001 Maize endoplasmic reticulum, plasma membrane 12.28 72.92
KRH75771 Soybean cytosol, golgi, mitochondrion, peroxisome 80.0 72.61
CDX76176 Canola mitochondrion 76.14 71.85
CDY13168 Canola mitochondrion, plasma membrane 76.14 71.85
Bra014848.1-P Field mustard mitochondrion 75.09 70.86
AT3G54020.1 Thale cress mitochondrion, plasma membrane 75.79 70.82
KRH00099 Soybean golgi 77.89 70.25
CDX91395 Canola mitochondrion, plasma membrane 75.09 70.16
AT2G37940.1 Thale cress mitochondrion, plasma membrane 74.74 69.84
CDY14501 Canola mitochondrion, plasma membrane 74.74 68.93
CDY69104 Canola mitochondrion, plasma membrane 74.74 68.93
KRH49241 Soybean mitochondrion 76.49 68.77
Bra000029.1-P Field mustard plasma membrane 71.23 68.58
Bra017148.1-P Field mustard plasma membrane 73.33 68.52
CDY18417 Canola plasma membrane 73.33 68.52
CDY07761 Canola mitochondrion, plasma membrane 74.04 68.51
CDX74925 Canola mitochondrion, plasma membrane 73.33 68.3
CDX93341 Canola plasma membrane 72.98 68.2
Bra005148.1-P Field mustard mitochondrion, plasma membrane 72.28 67.99
Zm00001d038343_P001 Maize plasma membrane 72.98 65.2
GSMUA_Achr10P... Banana cytosol, golgi, mitochondrion, plasma membrane 71.58 64.97
EES19630 Sorghum cytosol, golgi, plasma membrane 72.63 64.89
GSMUA_AchrUn_... Banana cytosol, golgi, mitochondrion, plasma membrane 71.58 64.56
GSMUA_Achr6P23620_001 Banana golgi 70.53 64.22
TraesCS3B01G396900.1 Wheat golgi 72.98 63.8
TraesCS3A01G365000.1 Wheat plasma membrane 72.98 63.8
TraesCS3D01G358200.1 Wheat golgi 72.63 63.5
Os05t0452900-02 Rice cytosol, golgi, mitochondrion, plasma membrane 71.93 63.08
Zm00001d030613_P003 Maize mitochondrion, plasma membrane 69.12 62.94
GSMUA_Achr3P17660_001 Banana cytosol, golgi, mitochondrion, plasma membrane 69.12 62.74
Os05t0287800-01 Rice mitochondrion 68.77 62.62
HORVU1Hr1G073060.1 Barley plasma membrane 69.82 62.38
HORVU1Hr1G073040.1 Barley plasma membrane 69.82 62.38
KXG23698 Sorghum mitochondrion 68.07 61.98
TraesCS1D01G279500.1 Wheat plasma membrane 69.82 61.8
EES01758 Sorghum mitochondrion 70.18 61.73
Zm00001d041608_P001 Maize mitochondrion, plasma membrane 67.72 61.66
TraesCS1B01G289300.1 Wheat plasma membrane 69.47 61.49
Os01t0850100-01 Rice cytosol, golgi, mitochondrion, plasma membrane 70.18 61.35
Zm00001d012380_P002 Maize plasma membrane 69.47 61.11
TraesCS1A01G280400.1 Wheat plasma membrane 68.77 61.06
Zm00001d042851_P003 Maize golgi, plasma membrane, plastid 69.82 56.06
CDY18431 Canola plasma membrane 44.91 55.17
HORVU3Hr1G085630.8 Barley plastid 67.02 54.26
Protein Annotations
EnsemblPlants:PGSC0003DMT400049398EnsemblPlantsGene:PGSC0003DMG400019190EntrezGene:102592126GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:Sphingomyelin_synth-like_domPANTHER:PTHR21290PANTHER:PTHR21290:SF46PFAM:PF14360PGSC:PGSC0003DMG400019190RefSeq:XP_006349480.1
TMHMM:TMhelixUniParc:UPI000294CAC8UniProt:M1BNN6MapMan:5.4.13.1::
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400019190]
Coordinates
chr10:-:50685153..50689461
Molecular Weight (calculated)
32820.4 Da
IEP (calculated)
9.643
GRAVY (calculated)
0.279
Length
285 amino acids
Sequence
(BLAST)
001: MSFYIGREAS KLWKRICTET GIEINLLSEK WKYILGGLIF QYIHGFAARG VHYIHRPGPT LQDVGFFLLR ELGQDKGYIS ETVFTTLFLS FVLWTFHPFF
101: FKIKKIYTVL IWCRVLAFLA ACQFLRIITF YSTQLPGPNY HCREGSKLAT LPPPNSVLEV LLINFPRGML YGCGDLIFSS HMIFSLIFVR TYHKYGTRRF
201: IKLCAWLAVI AQSFLIVASR KHYTVDVVVA WYTVNLVVFF VDKQLPELPD RTSAALILPL SKDSKAKEEN HKLLNANSGD PAEWI
Best Arabidopsis Sequence Match ( AT3G54020.1 )
(BLAST)
001: MTLYIRREAS KLWRRFCSEI TTEIGLLAEN WKYLLAGLLC QYIHGLAARG VHYIHRPGPT LQDSGFFVLP ELGQDKGFIS ETVFTCVFLS FFLWTFHPFI
101: VKSKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSELAR LPRPHNVLEV LLLNFPRGVI YGCGDLIFSS HMIFTLVFVR TYQKYGSKRF
201: IKLLGWVIAI LQSLLIIASR KHYTVDVVVA WYTVNLVVFF LDKKLPELPD RTTALLPVIS KDRTKEESHK LLNGNGVDPA DRRPRAQVNG KDSNGGHTDN
301: ATNGT
Arabidopsis Description
IPCS1Phosphatidylinositol:ceramide inositolphosphotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M325]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.