Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- plasma membrane 3
- endoplasmic reticulum 1
- vacuole 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27341663
|
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d003674_P001 | |
| Zm00001d003675_P001 | |
| Zm00001d025412_P001 | |
| Zm00001d034777_P005 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES01758 | Sorghum | mitochondrion | 94.14 | 94.14 |
| Os01t0850100-01 | Rice | cytosol, golgi, mitochondrion, plasma membrane | 86.73 | 86.2 |
| Zm00001d042851_P003 | Maize | golgi, plasma membrane, plastid | 92.28 | 84.23 |
| TraesCS3A01G365000.1 | Wheat | plasma membrane | 84.26 | 83.74 |
| TraesCS3B01G396900.1 | Wheat | golgi | 84.26 | 83.74 |
| TraesCS3D01G358200.1 | Wheat | golgi | 83.33 | 82.82 |
| Zm00001d038343_P001 | Maize | plasma membrane | 79.32 | 80.56 |
| VIT_06s0004g05800.t01 | Wine grape | mitochondrion | 66.05 | 73.54 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, mitochondrion, plasma membrane | 70.68 | 72.93 |
| KRH00099 | Soybean | golgi | 70.68 | 72.47 |
| GSMUA_Achr3P17660_001 | Banana | cytosol, golgi, mitochondrion, plasma membrane | 69.75 | 71.97 |
| GSMUA_Achr6P23620_001 | Banana | golgi | 69.44 | 71.89 |
| VIT_08s0007g01510.t01 | Wine grape | cytosol, golgi, mitochondrion, plasma membrane | 69.44 | 71.2 |
| GSMUA_AchrUn_... | Banana | cytosol, golgi, mitochondrion, plasma membrane | 69.44 | 71.2 |
| KRG88789 | Soybean | cytosol, golgi, mitochondrion, plasma membrane | 68.83 | 71.02 |
| AT3G54020.1 | Thale cress | mitochondrion, plasma membrane | 66.36 | 70.49 |
| HORVU3Hr1G085630.8 | Barley | plastid | 76.54 | 70.45 |
| CDX76176 | Canola | mitochondrion | 65.43 | 70.2 |
| CDY13168 | Canola | mitochondrion, plasma membrane | 65.43 | 70.2 |
| KRH75771 | Soybean | cytosol, golgi, mitochondrion, peroxisome | 67.9 | 70.06 |
| PGSC0003DMT400049398 | Potato | plasma membrane | 61.11 | 69.47 |
| KRH49241 | Soybean | mitochondrion | 67.9 | 69.4 |
| Bra000029.1-P | Field mustard | plasma membrane | 63.27 | 69.26 |
| Bra014848.1-P | Field mustard | mitochondrion | 64.51 | 69.21 |
| CDX91395 | Canola | mitochondrion, plasma membrane | 64.51 | 68.52 |
| Zm00001d041608_P001 | Maize | mitochondrion, plasma membrane | 66.05 | 68.37 |
| CDY07761 | Canola | mitochondrion, plasma membrane | 64.81 | 68.18 |
| CDY69104 | Canola | mitochondrion, plasma membrane | 64.81 | 67.96 |
| CDY14501 | Canola | mitochondrion, plasma membrane | 64.81 | 67.96 |
| PGSC0003DMT400028621 | Potato | cytosol, golgi, plasma membrane | 64.81 | 67.96 |
| AT2G37940.1 | Thale cress | mitochondrion, plasma membrane | 63.89 | 67.87 |
| CDY18417 | Canola | plasma membrane | 63.58 | 67.54 |
| CDX93341 | Canola | plasma membrane | 63.58 | 67.54 |
| Bra017148.1-P | Field mustard | plasma membrane | 63.58 | 67.54 |
| AT2G29525.1 | Thale cress | plasma membrane | 60.19 | 67.47 |
| Zm00001d030613_P003 | Maize | mitochondrion, plasma membrane | 64.81 | 67.09 |
| Bra005148.1-P | Field mustard | mitochondrion, plasma membrane | 62.65 | 67.0 |
| CDX74925 | Canola | mitochondrion, plasma membrane | 63.27 | 66.99 |
| Solyc10g086690.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 60.49 | 66.89 |
| Zm00001d046198_P001 | Maize | endoplasmic reticulum, plasma membrane | 9.88 | 66.67 |
| Solyc10g084990.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 63.89 | 66.35 |
| Solyc09g011740.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 64.2 | 65.82 |
| PGSC0003DMT400052472 | Potato | plasma membrane | 63.89 | 65.51 |
| CDY18431 | Canola | plasma membrane | 39.51 | 55.17 |
Protein Annotations
| EntrezGene:100216799 | MapMan:5.4.13.1 | ProteinID:AQK99400.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | UniProt:K7W3A2 | PFAM:PF14360 | PANTHER:PTHR21290 |
| PANTHER:PTHR21290:SF46 | InterPro:Sphingomyelin_synth-like_dom | TMHMM:TMhelix | UniParc:UPI000220CCFC | EnsemblPlantsGene:Zm00001d012380 | EnsemblPlants:Zm00001d012380_P002 |
| EnsemblPlants:Zm00001d012380_T002 | SEG:seg | : | : | : | : |
Description
Phosphatidylinositol:ceramide inositolphosphotransferase 1
Coordinates
chr8:-:173245748..173250090
Molecular Weight (calculated)
37223.5 Da
IEP (calculated)
9.529
GRAVY (calculated)
0.059
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MYVARESTKL WRRVCAETTA ELQLLLQKWQ LLLAGLVFQY IHGLAARGVH YLHQPGPLLQ DLGFMALPEL GQEKGYLSES VFTFIFISFL LWSFHPFIYH
101: SKRFYTVLLW RRVLAFLVAS QFLRIMTFYS TQLPGPNYHC REGSKLATLP PPNNALEVLL INFPRGVLFG CGDLIFSSHM IFTLVFVRTY HKYGSNRLIK
201: LLSWFMAVIQ SLLIIASRKH YTVDVVVAWY TVNLVVFFVD NKLPEMADRT NGLSLLPVST KDKDGRMKEE LHKLEKDGRM MDEFHKLLNG NSIDATDWRQ
301: RVQMNGKHGE DTSHTVADAT SAGT
101: SKRFYTVLLW RRVLAFLVAS QFLRIMTFYS TQLPGPNYHC REGSKLATLP PPNNALEVLL INFPRGVLFG CGDLIFSSHM IFTLVFVRTY HKYGSNRLIK
201: LLSWFMAVIQ SLLIIASRKH YTVDVVVAWY TVNLVVFFVD NKLPEMADRT NGLSLLPVST KDKDGRMKEE LHKLEKDGRM MDEFHKLLNG NSIDATDWRQ
301: RVQMNGKHGE DTSHTVADAT SAGT
001: MPVYVDREAP KLWRRIYSEA TLEASLLAEK WKLVLAGLVF QYIHGLAAHG VHYLHRPGPT LQDAGFFILP ALGQDKAFFS ETVFVTIFGS FILWTFHPFV
101: SHSKKICTVL IWCRVFVYLA ASQSLRIITF FATQLPGPNY HCREGSKLAK IPPPKNVLEV LLINFPDGVI YGCGDLIFSS HTIFTLVFVR TYQRYGTRRW
201: IKHLAWLMAV IQSILIIASR KHYTVDIVVA WYTVNLVMFY VDSKLPEMAE RSSGPSPTPL LPLSTKDSKN KSKEDHQRLL NENNVADDH
101: SHSKKICTVL IWCRVFVYLA ASQSLRIITF FATQLPGPNY HCREGSKLAK IPPPKNVLEV LLINFPDGVI YGCGDLIFSS HTIFTLVFVR TYQRYGTRRW
201: IKHLAWLMAV IQSILIIASR KHYTVDIVVA WYTVNLVMFY VDSKLPEMAE RSSGPSPTPL LPLSTKDSKN KSKEDHQRLL NENNVADDH
Arabidopsis Description
IPCS3Phosphatidylinositol:ceramide inositolphosphotransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y01]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.