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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • golgi 2
  • extracellular 1
  • plasma membrane 3
  • endoplasmic reticulum 1
  • vacuole 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:golgi
Predotar:mitochondrion
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra017148.1-P Field mustard plasma membrane 99.67 99.67
CDX93341 Canola plasma membrane 99.67 99.67
CDX91395 Canola mitochondrion, plasma membrane 95.74 95.74
CDX74925 Canola mitochondrion, plasma membrane 95.74 95.42
AT2G37940.1 Thale cress mitochondrion, plasma membrane 95.08 95.08
CDY14501 Canola mitochondrion, plasma membrane 96.07 94.82
CDY69104 Canola mitochondrion, plasma membrane 96.07 94.82
CDY07761 Canola mitochondrion, plasma membrane 95.74 94.81
CDX76176 Canola mitochondrion 85.25 86.09
CDY13168 Canola mitochondrion, plasma membrane 85.25 86.09
KRG88789 Soybean cytosol, golgi, mitochondrion, plasma membrane 78.36 76.11
KRH75771 Soybean cytosol, golgi, mitochondrion, peroxisome 77.38 75.16
Zm00001d046198_P001 Maize endoplasmic reticulum, plasma membrane 11.8 75.0
VIT_08s0007g01510.t01 Wine grape cytosol, golgi, mitochondrion, plasma membrane 77.7 75.0
CDY18431 Canola plasma membrane 57.05 75.0
KRH00099 Soybean golgi 77.05 74.37
PGSC0003DMT400049398 Potato plasma membrane 68.52 73.33
KRH49241 Soybean mitochondrion 76.07 73.19
Solyc09g011740.2.1 Tomato cytosol, endoplasmic reticulum, plasma membrane 75.74 73.1
PGSC0003DMT400028621 Potato cytosol, golgi, plasma membrane 73.77 72.82
PGSC0003DMT400052472 Potato plasma membrane 75.41 72.78
Solyc10g084990.1.1 Tomato cytosol, golgi, mitochondrion, plasma membrane 72.79 71.15
Solyc10g086690.1.1 Tomato cytosol, golgi, mitochondrion, plasma membrane 67.87 70.65
GSMUA_Achr3P17660_001 Banana cytosol, golgi, mitochondrion, plasma membrane 70.16 68.15
GSMUA_Achr6P23620_001 Banana golgi 69.51 67.73
GSMUA_AchrUn_... Banana cytosol, golgi, mitochondrion, plasma membrane 69.51 67.09
GSMUA_Achr10P... Banana cytosol, golgi, mitochondrion, plasma membrane 68.85 66.88
HORVU1Hr1G073040.1 Barley plasma membrane 69.18 66.14
EES19630 Sorghum cytosol, golgi, plasma membrane 69.18 66.14
Zm00001d038343_P001 Maize plasma membrane 69.18 66.14
HORVU1Hr1G073060.1 Barley plasma membrane 69.18 66.14
TraesCS3A01G365000.1 Wheat plasma membrane 70.16 65.64
TraesCS3B01G396900.1 Wheat golgi 70.16 65.64
TraesCS3D01G358200.1 Wheat golgi 69.84 65.34
Os01t0850100-01 Rice cytosol, golgi, mitochondrion, plasma membrane 69.51 65.03
TraesCS1D01G279500.1 Wheat plasma membrane 68.52 64.91
Os05t0287800-01 Rice mitochondrion 66.56 64.86
EES01758 Sorghum mitochondrion 68.85 64.81
TraesCS1B01G289300.1 Wheat plasma membrane 68.2 64.6
Zm00001d041608_P001 Maize mitochondrion, plasma membrane 66.23 64.54
Os05t0452900-02 Rice cytosol, golgi, mitochondrion, plasma membrane 68.52 64.31
KXG23698 Sorghum mitochondrion 65.9 64.22
Zm00001d030613_P003 Maize mitochondrion, plasma membrane 65.9 64.22
TraesCS1A01G280400.1 Wheat plasma membrane 67.21 63.86
Zm00001d012380_P002 Maize plasma membrane 67.54 63.58
Zm00001d042851_P003 Maize golgi, plasma membrane, plastid 68.85 59.15
HORVU3Hr1G085630.8 Barley plastid 64.92 56.25
Protein Annotations
EnsemblPlants:CDY18417EnsemblPlantsGene:GSBRNA2T00005411001GO:A0A078G094GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:Sphingomyelin_synth-like_domPANTHER:PTHR21290PANTHER:PTHR21290:SF33PFAM:PF14360ProteinID:CDY18417ProteinID:CDY18417.1
TMHMM:TMhelixUniParc:UPI0004EF0927UniProt:A0A078G094MapMan:5.4.13.1::
Description
BnaA04g21700DBnaA04g21700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G094]
Coordinates
chrLK032085:-:353029..355552
Molecular Weight (calculated)
35027.9 Da
IEP (calculated)
9.527
GRAVY (calculated)
0.114
Length
305 amino acids
Sequence
(BLAST)
001: MTLYIRRESS KLWKRFCSEI TTEIGLLAEN WKYLVAGIIC QYIHGLAAKG VHYIHRPGPT LQDLGFFLLP ELGQERSYIS ETVFTSVFLS FFLWTFHPFI
101: LKSKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSKVAR MPWPKNPLEV LEINPHGVMY GCGDLIFSSH MIFTLVFVLT YQKYGTKRFI
201: KLFGWLTAFV QSLLIIASRK HYTVDVVVAW YTVNLVVFCL DKKLPELPDR TTVLLPVISK DRTKEENHKL LNGNGVDPAD WRPRAQVNGK IDSNGVHSDN
301: SINGA
Best Arabidopsis Sequence Match ( AT2G37940.2 )
(BLAST)
001: MTLYIRRESS KLWKRFCSEI STEIGLLAEN WKYLLAGLIC QYIHGLAAKG VHYIHRPGPT LQDLGFFLLP ELGQERSYIS ETVFTSVFLS FFLWTFHPFI
101: LKTKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSKVSR LPWPKSALEV LEINPHGVMY GCGDLIFSSH MIFTLVFVRT YQKYGTKRFI
201: KLFGWLTAIV QSLLIIASRK HYSVDVVVAW YTVNLVVFCL DKKLPELPDR TAVLLPVISK DRTKEENHKL LNGNGVDPAD WRPRAQVNGK IDSNGVHTDN
301: TMNGA
Arabidopsis Description
IPCS2ERH1 [Source:UniProtKB/TrEMBL;Acc:A0A178VV03]
SUBAcon: [plasma membrane,mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.