Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G54020.1 | KXG26318 | AT2G23420.1 | 21798944 |
| AT3G54020.1 | OQU90665 | AT2G23420.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d012380_P002 | Maize | plasma membrane | 94.14 | 94.14 |
| Os01t0850100-01 | Rice | cytosol, golgi, mitochondrion, plasma membrane | 88.27 | 87.73 |
| Zm00001d042851_P003 | Maize | golgi, plasma membrane, plastid | 93.83 | 85.63 |
| TraesCS3A01G365000.1 | Wheat | plasma membrane | 86.11 | 85.58 |
| TraesCS3B01G396900.1 | Wheat | golgi | 85.8 | 85.28 |
| TraesCS3D01G358200.1 | Wheat | golgi | 85.19 | 84.66 |
| EES19630 | Sorghum | cytosol, golgi, plasma membrane | 79.01 | 80.25 |
| GSMUA_Achr3P17660_001 | Banana | cytosol, golgi, mitochondrion, plasma membrane | 72.22 | 74.52 |
| GSMUA_Achr6P23620_001 | Banana | golgi | 70.68 | 73.16 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, mitochondrion, plasma membrane | 70.68 | 72.93 |
| GSMUA_AchrUn_... | Banana | cytosol, golgi, mitochondrion, plasma membrane | 70.99 | 72.78 |
| VIT_06s0004g05800.t01 | Wine grape | mitochondrion | 65.12 | 72.51 |
| HORVU3Hr1G085630.8 | Barley | plastid | 78.7 | 72.44 |
| KRH00099 | Soybean | golgi | 70.37 | 72.15 |
| VIT_08s0007g01510.t01 | Wine grape | cytosol, golgi, mitochondrion, plasma membrane | 70.06 | 71.84 |
| AT3G54020.1 | Thale cress | mitochondrion, plasma membrane | 67.59 | 71.8 |
| KRG88789 | Soybean | cytosol, golgi, mitochondrion, plasma membrane | 69.14 | 71.34 |
| CDY13168 | Canola | mitochondrion, plasma membrane | 66.36 | 71.19 |
| CDX76176 | Canola | mitochondrion | 66.36 | 71.19 |
| KRH75771 | Soybean | cytosol, golgi, mitochondrion, peroxisome | 68.21 | 70.38 |
| Bra014848.1-P | Field mustard | mitochondrion | 65.43 | 70.2 |
| PGSC0003DMT400049398 | Potato | plasma membrane | 61.73 | 70.18 |
| PGSC0003DMT400028621 | Potato | cytosol, golgi, plasma membrane | 66.67 | 69.9 |
| Bra000029.1-P | Field mustard | plasma membrane | 63.58 | 69.59 |
| CDX91395 | Canola | mitochondrion, plasma membrane | 65.43 | 69.51 |
| KRH49241 | Soybean | mitochondrion | 67.9 | 69.4 |
| CDY69104 | Canola | mitochondrion, plasma membrane | 65.74 | 68.93 |
| CDY14501 | Canola | mitochondrion, plasma membrane | 65.74 | 68.93 |
| AT2G37940.1 | Thale cress | mitochondrion, plasma membrane | 64.81 | 68.85 |
| CDX93341 | Canola | plasma membrane | 64.81 | 68.85 |
| Bra017148.1-P | Field mustard | plasma membrane | 64.81 | 68.85 |
| CDY18417 | Canola | plasma membrane | 64.81 | 68.85 |
| KXG23698 | Sorghum | mitochondrion | 66.05 | 68.37 |
| CDY07761 | Canola | mitochondrion, plasma membrane | 64.81 | 68.18 |
| AT2G29525.1 | Thale cress | plasma membrane | 60.8 | 68.17 |
| CDX74925 | Canola | mitochondrion, plasma membrane | 64.2 | 67.97 |
| Solyc10g084990.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 65.43 | 67.95 |
| Solyc10g086690.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 61.42 | 67.92 |
| Bra005148.1-P | Field mustard | mitochondrion, plasma membrane | 63.27 | 67.66 |
| Solyc09g011740.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 65.43 | 67.09 |
| PGSC0003DMT400052472 | Potato | plasma membrane | 64.81 | 66.46 |
| CDY18431 | Canola | plasma membrane | 40.12 | 56.03 |
Protein Annotations
| MapMan:5.4.13.1 | EntrezGene:8060097 | UniProt:C5XPT9 | EnsemblPlants:EES01758 | ProteinID:EES01758 | ProteinID:EES01758.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0005802 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0030148 | GO:GO:0045140 |
| PFAM:PF14360 | PANTHER:PTHR21290 | PANTHER:PTHR21290:SF46 | EnsemblPlantsGene:SORBI_3003G357100 | InterPro:Sphingomyelin_synth-like_dom | TMHMM:TMhelix |
| UniParc:UPI0001A84673 | RefSeq:XP_002456638.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:67539390..67543995
Molecular Weight (calculated)
37357.8 Da
IEP (calculated)
9.673
GRAVY (calculated)
0.046
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MYVARESTKL WRRVCAETTA ELQLLFEKWQ LLLAGLVFQY IHGLAARGVH YLHRPGPLLQ DLGFMALPEL GQEKGYLSET VFTFIFISFL LWSFHPFIYH
101: SKRFYTVLLW RRVLAFLVAS QFLRIMTFYS TQLPGPNFHC REGSKLATLP PPNNALEVLL LNFPRGVLFG CGDLIFSSHM IFTLVFVRTY HKYGSNRLIK
201: LLSWLMAVIQ SLLIIASRKH YTVDVVVAWY TVNLVVFFID KKLPEMPDRT NGLSLLPVSI KDKDGKMKED LHKLEKDGRM MDEFHKLLNG NTVDATDWRQ
301: RVQMNGKHGE DTNHTVSDAT PTGT
101: SKRFYTVLLW RRVLAFLVAS QFLRIMTFYS TQLPGPNFHC REGSKLATLP PPNNALEVLL LNFPRGVLFG CGDLIFSSHM IFTLVFVRTY HKYGSNRLIK
201: LLSWLMAVIQ SLLIIASRKH YTVDVVVAWY TVNLVVFFID KKLPEMPDRT NGLSLLPVSI KDKDGKMKED LHKLEKDGRM MDEFHKLLNG NTVDATDWRQ
301: RVQMNGKHGE DTNHTVSDAT PTGT
001: MTLYIRREAS KLWRRFCSEI TTEIGLLAEN WKYLLAGLLC QYIHGLAARG VHYIHRPGPT LQDSGFFVLP ELGQDKGFIS ETVFTCVFLS FFLWTFHPFI
101: VKSKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSELAR LPRPHNVLEV LLLNFPRGVI YGCGDLIFSS HMIFTLVFVR TYQKYGSKRF
201: IKLLGWVIAI LQSLLIIASR KHYTVDVVVA WYTVNLVVFF LDKKLPELPD RTTALLPVIS KDRTKEESHK LLNGNGVDPA DRRPRAQVNG KDSNGGHTDN
301: ATNGT
101: VKSKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSELAR LPRPHNVLEV LLLNFPRGVI YGCGDLIFSS HMIFTLVFVR TYQKYGSKRF
201: IKLLGWVIAI LQSLLIIASR KHYTVDVVVA WYTVNLVVFF LDKKLPELPD RTTALLPVIS KDRTKEESHK LLNGNGVDPA DRRPRAQVNG KDSNGGHTDN
301: ATNGT
Arabidopsis Description
IPCS1Phosphatidylinositol:ceramide inositolphosphotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M325]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.