Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G074990.1 | |
| HORVU7Hr1G088900.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G54020.1 | HORVU2Hr1G074990.1 | AT2G23420.1 | 21798944 |
| AT3G54020.1 | HORVU7Hr1G088900.1 | AT4G19030.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G365000.1 | Wheat | plasma membrane | 80.68 | 87.12 |
| TraesCS3B01G396900.1 | Wheat | golgi | 80.68 | 87.12 |
| TraesCS3D01G358200.1 | Wheat | golgi | 79.83 | 86.2 |
| Os01t0850100-01 | Rice | cytosol, golgi, mitochondrion, plasma membrane | 74.43 | 80.37 |
| EES01758 | Sorghum | mitochondrion | 72.44 | 78.7 |
| Zm00001d012380_P002 | Maize | plasma membrane | 70.45 | 76.54 |
| HORVU1Hr1G073060.1 | Barley | plasma membrane | 65.62 | 72.41 |
| HORVU1Hr1G073040.1 | Barley | plasma membrane | 65.62 | 72.41 |
| Zm00001d042851_P003 | Maize | golgi, plasma membrane, plastid | 72.73 | 72.11 |
| AT3G54020.1 | Thale cress | mitochondrion, plasma membrane | 58.52 | 67.54 |
| CDX76176 | Canola | mitochondrion | 57.67 | 67.22 |
| CDY13168 | Canola | mitochondrion, plasma membrane | 57.67 | 67.22 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, mitochondrion, plasma membrane | 59.94 | 67.2 |
| PGSC0003DMT400049398 | Potato | plasma membrane | 54.26 | 67.02 |
| VIT_06s0004g05800.t01 | Wine grape | mitochondrion | 55.11 | 66.67 |
| GSMUA_Achr3P17660_001 | Banana | cytosol, golgi, mitochondrion, plasma membrane | 59.09 | 66.24 |
| Bra014848.1-P | Field mustard | mitochondrion | 56.82 | 66.23 |
| GSMUA_AchrUn_... | Banana | cytosol, golgi, mitochondrion, plasma membrane | 59.38 | 66.14 |
| GSMUA_Achr6P23620_001 | Banana | golgi | 58.81 | 66.13 |
| KRG88789 | Soybean | cytosol, golgi, mitochondrion, plasma membrane | 58.52 | 65.61 |
| Bra000029.1-P | Field mustard | plasma membrane | 55.11 | 65.54 |
| Solyc10g086690.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 54.26 | 65.19 |
| CDY18417 | Canola | plasma membrane | 56.25 | 64.92 |
| Bra017148.1-P | Field mustard | plasma membrane | 56.25 | 64.92 |
| VIT_08s0007g01510.t01 | Wine grape | cytosol, golgi, mitochondrion, plasma membrane | 58.24 | 64.87 |
| KRH75771 | Soybean | cytosol, golgi, mitochondrion, peroxisome | 57.67 | 64.65 |
| CDX93341 | Canola | plasma membrane | 55.97 | 64.59 |
| AT2G37940.1 | Thale cress | mitochondrion, plasma membrane | 55.97 | 64.59 |
| CDX91395 | Canola | mitochondrion, plasma membrane | 55.97 | 64.59 |
| Solyc09g011740.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 57.95 | 64.56 |
| KRH00099 | Soybean | golgi | 57.95 | 64.56 |
| PGSC0003DMT400028621 | Potato | cytosol, golgi, plasma membrane | 56.25 | 64.08 |
| CDY69104 | Canola | mitochondrion, plasma membrane | 56.25 | 64.08 |
| CDY14501 | Canola | mitochondrion, plasma membrane | 56.25 | 64.08 |
| CDX74925 | Canola | mitochondrion, plasma membrane | 55.11 | 63.4 |
| Bra005148.1-P | Field mustard | mitochondrion, plasma membrane | 54.55 | 63.37 |
| AT2G29525.1 | Thale cress | plasma membrane | 51.99 | 63.32 |
| CDY07761 | Canola | mitochondrion, plasma membrane | 55.4 | 63.31 |
| PGSC0003DMT400052472 | Potato | plasma membrane | 56.82 | 63.29 |
| Solyc10g084990.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 55.97 | 63.14 |
| KRH49241 | Soybean | mitochondrion | 55.97 | 62.15 |
| CDY18431 | Canola | plasma membrane | 36.93 | 56.03 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G085630.8 | EnsemblPlantsGene:HORVU3Hr1G085630 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Sphingomyelin_synth-like_dom |
| PANTHER:PTHR21290 | PANTHER:PTHR21290:SF46 | PFAM:PF14360 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B4693A7 |
| UniProt:A0A287M1W1 | MapMan:5.4.13.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:613069144..613072608
Molecular Weight (calculated)
39544.1 Da
IEP (calculated)
9.977
GRAVY (calculated)
-0.096
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVSPPGVSV SVSFSRPTGN GRRGHGDLHR AGVNQAMEEG VRGDVGGAAA SVREVAPAAC RSRVSDQYIH GLAARGVHYL HRPGPILQDM GFMALPELGQ
101: DKGYLSETVF TSIFLSFLLW SFHPFVYHSK RFYTVLLWRR VLAFLVASQF LRIITFYSTQ LPGPNYHCRE GSKLATLPPP KNVLEVLLIN FPRGVLFGCG
201: DLIFSSHMIF TLVFVRTYHK YGSKRLIKLF AWLMAIIQSL LIIASRKHYT VDVVVAWYTV NLVVFFIDKN LPEMPDRTSG LSLLPVSTKD KGDRMKEELH
301: KPEKDSKMKD ELHKLLNGNT VDSTDRRQWM PMNGKHGEDM NHTLSDATPN GT
101: DKGYLSETVF TSIFLSFLLW SFHPFVYHSK RFYTVLLWRR VLAFLVASQF LRIITFYSTQ LPGPNYHCRE GSKLATLPPP KNVLEVLLIN FPRGVLFGCG
201: DLIFSSHMIF TLVFVRTYHK YGSKRLIKLF AWLMAIIQSL LIIASRKHYT VDVVVAWYTV NLVVFFIDKN LPEMPDRTSG LSLLPVSTKD KGDRMKEELH
301: KPEKDSKMKD ELHKLLNGNT VDSTDRRQWM PMNGKHGEDM NHTLSDATPN GT
001: MPVYVDREAP KLWRRIYSEA TLEASLLAEK WKLVLAGLVF QYIHGLAAHG VHYLHRPGPT LQDAGFFILP ALGQDKAFFS ETVFVTIFGS FILWTFHPFV
101: SHSKKICTVL IWCRVFVYLA ASQSLRIITF FATQLPGPNY HCREGSKLAK IPPPKNVLEV LLINFPDGVI YGCGDLIFSS HTIFTLVFVR TYQRYGTRRW
201: IKHLAWLMAV IQSILIIASR KHYTVDIVVA WYTVNLVMFY VDSKLPEMAE RSSGPSPTPL LPLSTKDSKN KSKEDHQRLL NENNVADDH
101: SHSKKICTVL IWCRVFVYLA ASQSLRIITF FATQLPGPNY HCREGSKLAK IPPPKNVLEV LLINFPDGVI YGCGDLIFSS HTIFTLVFVR TYQRYGTRRW
201: IKHLAWLMAV IQSILIIASR KHYTVDIVVA WYTVNLVMFY VDSKLPEMAE RSSGPSPTPL LPLSTKDSKN KSKEDHQRLL NENNVADDH
Arabidopsis Description
IPCS3Phosphatidylinositol:ceramide inositolphosphotransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q56Y01]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.