Factsheet for GSMUA_Achr10P13770_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, golgi, cytosol

Predictor Summary:

nucleus 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, mitochondrion, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr2P08220_001
GSMUA_Achr4P10230_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54020.1	GSMUA_Achr11P...	AT2G23420.1	21798944
AT3G54020.1	GSMUA_Achr2P08220_001	AT2G23420.1	21798944
AT3G54020.1	GSMUA_Achr4P10230_001	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol, golgi, mitochondrion, plasma membrane	86.62	86.08
GSMUA_Achr3P17660_001	Banana	cytosol, golgi, mitochondrion, plasma membrane	85.67	85.67
GSMUA_Achr6P23620_001	Banana	golgi	84.71	84.98
EES19630	Sorghum	cytosol, golgi, plasma membrane	76.11	74.92
Zm00001d038343_P001	Maize	plasma membrane	75.8	74.61
CDY13168	Canola	mitochondrion, plasma membrane	71.34	74.17
CDX76176	Canola	mitochondrion	71.02	73.84
VIT_08s0007g01510.t01	Wine grape	cytosol, golgi, mitochondrion, plasma membrane	73.89	73.42
TraesCS3A01G365000.1	Wheat	plasma membrane	75.8	73.01
TraesCS3B01G396900.1	Wheat	golgi	75.8	73.01
Bra014848.1-P	Field mustard	mitochondrion	70.06	72.85
HORVU1Hr1G073040.1	Barley	plasma membrane	73.89	72.73
HORVU1Hr1G073060.1	Barley	plasma membrane	73.89	72.73
Os01t0850100-01	Rice	cytosol, golgi, mitochondrion, plasma membrane	75.48	72.7
TraesCS3D01G358200.1	Wheat	golgi	75.48	72.7
Os05t0452900-02	Rice	cytosol, golgi, mitochondrion, plasma membrane	75.16	72.62
PGSC0003DMT400049398	Potato	plasma membrane	64.97	71.58
KRH00099	Soybean	golgi	71.97	71.52
AT3G54020.1	Thale cress	mitochondrion, plasma membrane	69.43	71.48
TraesCS1B01G289300.1	Wheat	plasma membrane	73.25	71.43
TraesCS1D01G279500.1	Wheat	plasma membrane	73.25	71.43
TraesCS1A01G280400.1	Wheat	plasma membrane	72.61	71.03
KRG88789	Soybean	cytosol, golgi, mitochondrion, plasma membrane	71.02	71.02
EES01758	Sorghum	mitochondrion	72.93	70.68
Zm00001d012380_P002	Maize	plasma membrane	72.93	70.68
VIT_06s0004g05800.t01	Wine grape	mitochondrion	64.97	70.1
KRH75771	Soybean	cytosol, golgi, mitochondrion, peroxisome	70.06	70.06
CDY14501	Canola	mitochondrion, plasma membrane	68.47	69.58
CDY69104	Canola	mitochondrion, plasma membrane	68.47	69.58
Bra000029.1-P	Field mustard	plasma membrane	65.29	69.26
AT2G37940.1	Thale cress	mitochondrion, plasma membrane	67.2	69.18
KRH49241	Soybean	mitochondrion	69.75	69.09
CDY18417	Canola	plasma membrane	66.88	68.85
Bra017148.1-P	Field mustard	plasma membrane	66.88	68.85
CDY07761	Canola	mitochondrion, plasma membrane	67.52	68.83
Solyc10g086690.1.1	Tomato	cytosol, golgi, mitochondrion, plasma membrane	64.01	68.6
CDX93341	Canola	plasma membrane	66.56	68.52
CDX91395	Canola	mitochondrion, plasma membrane	66.56	68.52
Bra005148.1-P	Field mustard	mitochondrion, plasma membrane	65.61	67.99
CDX74925	Canola	mitochondrion, plasma membrane	66.24	67.97
PGSC0003DMT400028621	Potato	cytosol, golgi, plasma membrane	66.88	67.96
Solyc10g084990.1.1	Tomato	cytosol, golgi, mitochondrion, plasma membrane	67.2	67.63
AT2G29525.1	Thale cress	plasma membrane	60.51	65.74
Zm00001d042851_P003	Maize	golgi, plasma membrane, plastid	73.89	65.35
Solyc09g011740.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	65.29	64.87
PGSC0003DMT400052472	Potato	plasma membrane	64.01	63.61
HORVU3Hr1G085630.8	Barley	plastid	67.2	59.94
CDY18431	Canola	plasma membrane	41.4	56.03

Protein Annotations

EnsemblPlants:GSMUA_Achr10P13770_001	EnsemblPlants:GSMUA_Achr10T13770_001	EnsemblPlantsGene:GSMUA_Achr10G13770_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Sphingomyelin_synth-like_dom	PANTHER:PTHR21290	PANTHER:PTHR21290:SF46	PFAM:PF14360	SEG:seg	TMHMM:TMhelix
UniParc:UPI000295D546	UniProt:M0RI03	MapMan:5.4.13.1	:	:	:

Description

phosphatidic acid phosphatase-related, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G13770_001]

Coordinates

chr10:+:22265801..22269744

Molecular Weight (calculated)

36082.3 Da

IEP (calculated)

9.698

GRAVY (calculated)

0.124

Length

314 amino acids

Sequence
(BLAST)

001: MTLYITREAS KLWRKVCVET SVELQLLVEK WKLLLAGLVF QYIHGLSARG VHYLHQPGPT LQDLGFMILP ELGKERGYIS ESLFTFVFLS FVLWTFYPFV
101: YHSKRFYTVL LWRRVLAFLV ACQVLRIITF YSTQLPGPNY HCREGSKLAK LPPPESVTEV LLINFPRGVI YGCGDLIFSS HMIFTLVFVL TYHKYGSKRF
201: IKLLAWVTAI IQSLLIVASR KHYTVDIVVA WYTVNLVVFF IDKKLPEMPD RSSGSQPLLL LSVKEKEGNS REENLKLLNG NSVDTADWRQ RMQTNGNHGE
301: ESIHIRSESA ANGK

Best Arabidopsis Sequence Match ( AT3G54020.1 )
(BLAST)

001: MTLYIRREAS KLWRRFCSEI TTEIGLLAEN WKYLLAGLLC QYIHGLAARG VHYIHRPGPT LQDSGFFVLP ELGQDKGFIS ETVFTCVFLS FFLWTFHPFI
101: VKSKKIYTVL IWCRVLAFLV ACQFLRVITF YSTQLPGPNY HCREGSELAR LPRPHNVLEV LLLNFPRGVI YGCGDLIFSS HMIFTLVFVR TYQKYGSKRF
201: IKLLGWVIAI LQSLLIIASR KHYTVDVVVA WYTVNLVVFF LDKKLPELPD RTTALLPVIS KDRTKEESHK LLNGNGVDPA DRRPRAQVNG KDSNGGHTDN
301: ATNGT

Arabidopsis Description

IPCS1Phosphatidylinositol:ceramide inositolphosphotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M325]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.